Protein Alignment Ptx1 and sv

DIOPT Version :10

• Sequence 1: NP_001138130.2
• Gene: Ptx1 / 43664
• FlyBaseID: FBgn0020912
• Length: 610
• Species: Drosophila melanogaster
• Sequence 2: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Alignment Length: 644
• Identity: 115/644 - (17%)
• Similarity: 191/644 - (29%)
• Gaps: 279/644 - (43%)

  Fly    49 EAMSAESTGLCLQDLV-SAGTANGAGSAGSAESAT--------TTSTALSSGSTGSSTVNGGGSS 104
            :.:.||:  :|.||.| |..:.|......:||.|.        ..|.:|..|...:.:|:....:
  Fly   275 DRLLAEA--ICSQDNVPSVSSINRIVRNKAAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGT 337

  Fly   105 TSGTEHLHSHHSLHDSSSSVSISPAISSLMPIS-------SLSHLH---------HSAGQDLVGG 153
            ....:...|:.|.:..:::||.|.::.:.:|.|       |:.|::         :|..:....|
  Fly   338 IGEPQPPTSNSSANSVNTNVSASASVHASIPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTG 402

  Fly   154 YS-------QHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLDSTHLNNFQTSS 211
            ||       ||.||                                         :|.||    :
  Fly   403 YSINGILGIQHGHH-----------------------------------------SHNNN----N 422

  Fly   212 TSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQL 276
            .||::|.:.         .|::.|.:.|.:  |||...|:.....:|  .||||
  Fly   423 NSSVNNNNN---------TESSCKRKRIEA--HDENHDTNIHSDNDD--GKRQR----------- 463

  Fly   277 QELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFG 341
                          |||.....::||       :|    ..||..::.:.:.|
  Fly   464 --------------MSTYSGDQLYTN-------IW----SGKWCIKDDHKLLA------------ 491

  Fly   342 TQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVA--GN---HHQNSVNCFNT-- 399
                                                  .||::.|  ||   .:..:.|.|:|
  Fly   492 --------------------------------------ELGNLTASTGNCPATYYEASNGFSTTP 518

  Fly   400 -GASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPANPYMYRSAAEPCMSSSMSSSIA 463
             ..||...|.|:.|||..|:.:.....|::        ||....|.:...:..|.:..||..
  Fly   519 ISGSGATASGNDTSMLYDSITTISQTQSSI--------YTPAIGPSIGTGSLTPLVPISMHE--- 572

  Fly   464 TLRLKAKQ---------HASAGFGSPYSAPSPVSRSNSAGL---------------SACQYTGVG 504
             ::|.|..         :.:..|...|:  |..|..|.:.|               :.|..:...
  Fly   573 -MKLSANSIQEQTVPPFYTALAFDGNYT--SMTSLENCSSLVGQEHIVMPESSDSNTLCPISTRI 634

  Fly   505 VTDVVXENALGA-----------------------------LLNQHQHHLQHFSGGSVGGSGVPN 540
            |.|:. .|:...                             :.:.|.||:
  Fly   635 VPDITETNSTRVKEPLTNSDGCSEDNNKEPEKSNSSQSSDHIASPHLHHI--------------- 684

  Fly   541 GMQQHSGNMLHHSNLGLDHSDLGLVGGGPSNHQDEGNHSL----EGSNKSPMEAPLANS 595
            |.:|..||  ..|||........|:...||     |..||    ...|:|.:|..|:|:
  Fly   685 GEEQLRGN--RRSNLNASTHPSSLIPLQPS-----GGSSLLNINPSENRSDVELNLSNN 736

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ptx1	NP_001138130.2	Homeodomain	265..321	CDD:459649	9/55 (16%)
sv	NP_524633.3	PAX	175..299	CDD:128645	8/25 (32%)