DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and ey

DIOPT Version :9

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:663 Identity:155/663 - (23%)
Similarity:241/663 - (36%) Gaps:195/663 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TNGGGGVVSGALNGLEAMSAESTGLCLQDLVSAGTANGAGSAGSAESAT---TTSTALSSGSTGS 95
            :.|.|...:.|.|.:.|..:.|.|..:.::.|       ||.|:..|:|   .|:|.|:|..:|.
  Fly   231 STGSGSSSTSAGNSISAKVSVSIGGNVSNVAS-------GSRGTLSSSTDLMQTATPLNSSESGG 288

  Fly    96 STVNGGGSSTSGT-EHLHSHHSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQDLVGGYSQHP- 158
            ::.:|.||..... |.|...::.| ::....:.||.::.:...|.:||         |..|.|| 
  Fly   289 ASNSGEGSEQEAIYEKLRLLNTQH-AAGPGPLEPARAAPLVGQSPNHL---------GTRSSHPQ 343

  Fly   159 ----HHTVVPPH-----TPKHEPLEKLRIWAETG------DFRDSHSSMTAVANSLDSTHL---- 204
                :|..:..|     .|:|..    ..|..|.      ....:.:|:||.|:.....|.    
  Fly   344 LVHGNHQALQQHQQQSWPPRHYS----GSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPP 404

  Fly   205 NNFQTSSTSSISNRS-----------RDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKND 258
            |:.:  |.:||.::.           :...||::|....:.:.|| |:.|......|..::.:..
  Fly   405 NDIE--SLASIGHQRNCPVATEDIHLKKELDGHQSDETGSGEGEN-SNGGASNIGNTEDDQARLI 466

  Fly   259 KKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRE 323
            .|.|.| |.||.||:.|:..||..|.|..|||:..||.:|....|.|||::|||.|||||||:.|
  Fly   467 LKRKLQ-RNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREE 530

  Fly   324 -----RNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGS 383
                 |...|:..|:|...|...|.        ||..|                  |..::...|
  Fly   531 KLRNQRRTPNSTGASATSSSTSATA--------SLTDS------------------PNSLSACSS 569

  Fly   384 MVAGNHHQNSVNCFNTGASGVAVSMN-NASMLPGSMGSSLSNT-------------------SNV 428
            :::|:....||:..|..:|...:|.| ||..|...:.||.|.|                   .:.
  Fly   570 LLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIPHIRPSCTSDNDNGRQSEDC 634

  Fly   429 GAVGAPCP---------YTTPANPYMYRSAAEPCMSS---------------------SMSSSI- 462
            ..|.:|||         :...:|.:....|..|.:|.                     |||.|. 
  Fly   635 RRVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFGAMYSNMHHTALSMSDSYG 699

  Fly   463 ATLRLKAKQHASAGFGSPYSAPSPVSRSNS---AGLSACQYTGVGVTDVVXENALGALLNQHQHH 524
            |...:.:..|::.|   |.:.|||:.:...   :.|..|..|           .....:....||
  Fly   700 AVTPIPSFNHSAVG---PLAPPSPIPQQGDLTPSSLYPCHMT-----------LRPPPMAPAHHH 750

  Fly   525 LQHFSGGSVGGSGVPNGMQQHSGNMLHHSNLGLDHSDLGLVGGGPSNHQDEGNHSLEGSNKSPME 589
            :....||...|.|:.:|..         :|||.                     |..||....:.
  Fly   751 IVPGDGGRPAGVGLGSGQS---------ANLGA---------------------SCSGSGYEVLS 785

  Fly   590 A------PLANSS 596
            |      |:|:||
  Fly   786 AYALPPPPMASSS 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeobox 268..320 CDD:278475 27/51 (53%)
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 27/51 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450840
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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