DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Rhox8

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001004193.1 Gene:Rhox8 / 434768 MGIID:3579898 Length:320 Species:Mus musculus


Alignment Length:144 Identity:49/144 - (34%)
Similarity:69/144 - (47%) Gaps:20/144 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 ETGDFRDSHSSMTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENI---SSS 242
            |..:..:......|.|.:.|.|     ...|::.:.:||.|.  |..|..|...:.|.:   .:.
Mouse   191 EEEEEEEEEEEAAAAAAARDET-----TAGSSAPVDDRSHDA--GASSNGEDRGQGEELIPGGTK 248

  Fly   243 GHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEAR 307
            |.:...:.||:.|:|          |..||..||||||..|.||.||..:.|.|:|.|..:||:|
Mouse   249 GLEALPSPSGQLPRN----------RYRFTKFQLQELERIFERNHYPSAAARRELARWIGVTESR 303

  Fly   308 VRVWFKNRRAKWRK 321
            |..|||:||||:||
Mouse   304 VENWFKSRRAKYRK 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 29/55 (53%)
Rhox8NP_001004193.1 Homeodomain 262..317 CDD:459649 30/64 (47%)

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