DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and ems

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster


Alignment Length:80 Identity:29/80 - (36%)
Similarity:46/80 - (57%) Gaps:9/80 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 KRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNA 326
            ::.:|.||.|:..||.:|||.|..|:|...:.|:.:|...||:|.:|:|||:|||.|.::.::. 
  Fly   386 RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE- 449

  Fly   327 MNAAVAAADFKSGFG 341
                    |.|.|.|
  Fly   450 --------DEKGGEG 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 25/55 (45%)
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/55 (45%)

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