DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and pitx3

DIOPT Version :9

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_991238.1 Gene:pitx3 / 402974 ZFINID:ZDB-GENE-041229-4 Length:293 Species:Danio rerio


Alignment Length:321 Identity:146/321 - (45%)
Similarity:178/321 - (55%) Gaps:61/321 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 NFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTH 270
            :|...:.|...:.:....|.....::...|.::.|.:.......|....|::....|:|||||||
Zfish     2 DFNLLTDSEARSPALSLSDSGTPQHDPGCKGQDNSDTEKSHQNHTDESNPEDGSLKKKQRRQRTH 66

  Fly   271 FTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAAD 335
            ||||||||||.||.||||||||||||||:||||||||||||||||||||||||||..     |..
Zfish    67 FTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-----AEL 126

  Fly   336 FKSGFGTQF---MQPFADDSLYSSYPYNNW-TK--VPSPLGTKPFPW----PVNPLGSMVAGNHH 390
            .|:|||.||   |||:  |.:||.|.|||| ||  ..|||..|.||:    .|:||.|.      
Zfish   127 CKNGFGAQFNGLMQPY--DDMYSGYSYNNWATKSLASSPLSAKSFPFFNSMNVSPLSSQ------ 183

  Fly   391 QNSVNCFNTGASGVAVSMNNA-SMLP----GSMGSSLSNTSNVGAVGAP-----------CPYTT 439
                ..|:..:|  ..|||.| ||:|    |..||.|:|..|:..:.:|           |||.|
Zfish   184 ----PMFSPPSS--IPSMNMASSMVPSAVAGVPGSGLNNLGNLNNLNSPTLNSAAVSAAACPYAT 242

  Fly   440 PANPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQY 500
            .|.|||||   :.|     :||:|:|||||||||:  |..| :..:|||     .||.|||
Zfish   243 TAGPYMYR---DTC-----NSSLASLRLKAKQHAN--FAYP-AVQNPVS-----NLSPCQY 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeobox 268..320 CDD:278475 48/51 (94%)
pitx3NP_991238.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 16/66 (24%)
Cnd2 18..>79 CDD:303063 23/60 (38%)
Homeobox 64..116 CDD:278475 48/51 (94%)
OAR 251..268 CDD:281777 11/21 (52%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 255..268 10/12 (83%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:O35160 260..264 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I5907
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3550
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1432356at2759
OrthoFinder 1 1.000 - - FOG0001767
OrthoInspector 1 1.000 - - otm26409
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45882
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.070

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