DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Awh

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster


Alignment Length:150 Identity:44/150 - (29%)
Similarity:70/150 - (46%) Gaps:13/150 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 TTSGEEPKNDKKNK-RQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWF 312
            |:|.|....|..:| :.:|.||.||.:|||.|:..|..:..||....|.||..|.|::...:|||
  Fly   132 TSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWF 196

  Fly   313 KNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPL-GTKPFPW 376
            :|.||:.:|......|      ..:...|:.|.:..   :|..:|.:.|..:.|..| |:|...:
  Fly   197 QNSRARQKKHIHAGKN------KIREPEGSSFARHI---NLQLTYSFQNNAQNPMHLNGSKAGLY 252

  Fly   377 PVNPLGSMVAGNHHQNSVNC 396
            |.:.  |.:......:||:|
  Fly   253 PTHE--SSMDELSQDSSVHC 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 23/55 (42%)
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759
LIM2_AWH 69..123 CDD:188765
Homeodomain 149..205 CDD:459649 23/55 (42%)
Blue background indicates that the domain is not in the aligned region.

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