DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Gsc2

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001102316.1 Gene:Gsc2 / 363831 RGDID:1305333 Length:214 Species:Rattus norvegicus


Alignment Length:84 Identity:42/84 - (50%)
Similarity:54/84 - (64%) Gaps:5/84 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 SSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTE 305
            |:|......|||..|:     :|.||.||.|:.:|||.||..|.:|:|||:.|||.:|:...|.|
  Rat   118 STGSPALTGTSGPGPQ-----RRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAVRIRLRE 177

  Fly   306 ARVRVWFKNRRAKWRKRER 324
            .||.|||||||||||.::|
  Rat   178 ERVEVWFKNRRAKWRHQKR 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 33/55 (60%)
Gsc2NP_001102316.1 Homeodomain 137..193 CDD:459649 33/55 (60%)

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