DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptx1 and inv

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster


Alignment Length:345 Identity:85/345 - (24%)
Similarity:135/345 - (39%) Gaps:83/345 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LEAMSAESTGLCLQDLVSAGTANGAGSAGSAESATTTSTALSSGSTGSSTVNGGGSSTSGTEHLH 112
            :.|::|.:.|..|| :..|..|.....:|....|..|:|||..|..|:  |:.........:.:|
  Fly   196 VNALTAAAAGKQLQ-MAMAAAAVATVPSGQDALAQLTATALGLGPGGA--VHPHQQLLLQRDQVH 257

  Fly   113 SHH----------SLHDSSSSVSISPAI-----SSLMPISSLSHLHHSAGQDLVG---GYSQHPH 159
            .||          :||:.:...||...:     |.|..|.:||  .:..|..:.|   |.|::..
  Fly   258 HHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALS--GNIGGGSVSGSSTGSSKNSG 320

  Fly   160 HT---VVPPHTPKH--EPLEKLRIWAETGDFRDSHSSMTAV-ANSLDSTHLNNFQTSSTSSISNR 218
            :|   ..|...||.  :||...:..|.........||:..: :||.||.     .|:::||.:|.
  Fly   321 NTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNSNDSN-----STATSSSTTNT 380

  Fly   219 SRDRKDGNRS------VNETTIKTENISSSG--------------HDEPMTTSGEEPKNDKKNK- 262
            |....|..:|      ...|....::...||              .|.|  :||..|:..|..| 
  Fly   381 SGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTRYSDRP--SSGRSPRARKPKKP 443

  Fly   263 --------------------------RQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWT 301
                                      ..:|.||.|:..||..|:|.|:.|||.....|::::...
  Fly   444 ATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGEL 508

  Fly   302 NLTEARVRVWFKNRRAKWRK 321
            .|.||::::||:|:|||.:|
  Fly   509 GLNEAQIKIWFQNKRAKLKK 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 22/55 (40%)
invNP_523699.3 Homeodomain 472..528 CDD:459649 22/55 (40%)
Engrail_1_C_sig 529..554 CDD:431338 85/345 (25%)

Return to query results.
Submit another query.