DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptx1 and eve

DIOPT Version :9

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster


Alignment Length:520 Identity:119/520 - (22%)
Similarity:158/520 - (30%) Gaps:223/520 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 TEHLHSHHSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEP 172
            |.::.|||:.|| :|.|...|.:..|                |...|.:        |.||...|
  Fly     6 TYNMESHHAHHD-ASPVDQKPLVVDL----------------LATQYGK--------PQTPPPSP 45

  Fly   173 LEKLRIWAETGDFRDSHSSMTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTE 237
            .|.|                                 ||..:..|.||                 
  Fly    46 NECL---------------------------------SSPDNSLNGSR----------------- 60

  Fly   238 NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTN 302
                 |.:.|...|            .||.||.||..||..||..|.:..|.....|.|:|...|
  Fly    61 -----GSEIPADPS------------VRRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLN 108

  Fly   303 LTEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPS 367
            |.|:.::|||:|||.| .||:|.|:....||......|....:|. |.:|:...||         
  Fly   109 LPESTIKVWFQNRRMK-DKRQRIAVAWPYAAVYSDPAFAASILQA-AANSVGMPYP--------- 162

  Fly   368 PLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMG----SSLSNTSNV 428
                     |..|..:..|            ..|:.||.:...|:.:| .||    .::....:.
  Fly   163 ---------PYAPAAAAAA------------AAAAAVATNPMMATGMP-PMGMPQMPTMQMPGHS 205

  Fly   429 GAVGAPCPY----------------TTPANPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGF 477
            |..|.|.||                ..||.|:|:.        ..|..|.||             
  Fly   206 GHAGHPSPYGQYRYTPYHIPARPAPPHPAGPHMHH--------PHMMGSSAT------------- 249

  Fly   478 GSPYSAPSPVSRSNSAGL-----SACQYTGVGVTDVVXENALGALLNQHQHHLQHFSGGSVGGSG 537
            ||.|||       .:|||     ||..|||:||                               |
  Fly   250 GSSYSA-------GAAGLLGALPSATCYTGLGV-------------------------------G 276

  Fly   538 VPN----GMQQHSGNMLHHSNLGLDHSDLGLVGGGPSNHQDEGNHS--LEGSNKSPMEAPLANSS 596
            ||.    .:...|.:..|.|.|.|  |.:|      |:|....:.|  .:.:...|..|||..:|
  Fly   277 VPKTQTPPLDLQSSSSPHSSTLSL--SPVG------SDHAKVFDRSPVAQSAPSVPAPAPLTTTS 333

  Fly   597  596
              Fly   334  333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeobox 268..320 CDD:278475 23/51 (45%)
eveNP_523670.2 Homeobox 74..126 CDD:278475 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450936
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.