DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and HOXD4

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_055436.2 Gene:HOXD4 / 3233 HGNCID:5138 Length:255 Species:Homo sapiens


Alignment Length:215 Identity:36/215 - (16%)
Similarity:82/215 - (38%) Gaps:57/215 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VTILLKNAADKNYSVQLEQNTLTLRADDTE-----PLVLTLWNPI------------NTEQSTHK 64
            :..|..|:.|:...:::||..:...||...     |.:.:....:            |.:|:...
Human   153 INTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQMSSYQRMLVHRVAAYFGLDHNVDQTGKS 217

  Fly    65 ATPSKVEVKLAKLIGQRW-EALERKAPEQS----------AAAGSAAAAKKKHDW--DKITKEIE 116
            ...:|  ....::..||: |.|:.:..|:|          ::........:.|.:  |:.:|.||
Human   218 VIINK--TSSTRIPEQRFCEHLKDEKSEESQKRFILKRDNSSIDKEDNQNRMHPFRDDRRSKSIE 280

  Fly   117 KDDETKDDVSD-LF--------KKIYADAS---ED--------TRKAMMKSYYESGGTVLSTNWA 161
            :.:|....|.: :|        :.::.|.|   ||        .::.:.:::.:|.|   .|:.:
Human   281 EREEEYQRVRERIFAHDSVCSQESLFLDNSRLQEDMHICNETYKKRQLFRAHRDSSG---RTSGS 342

  Fly   162 EVGAKQVEVKPPDGCEYKKW 181
            ...:.:.|::.||  ..:.|
Human   343 RQSSSETELRWPD--HQRAW 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649
HOXD4NP_055436.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..127
Antp-type hexapeptide 133..138
Homeodomain 155..211 CDD:459649 8/55 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..255 8/44 (18%)
Blue background indicates that the domain is not in the aligned region.

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