DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and HOXD3

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:552 Identity:122/552 - (22%)
Similarity:183/552 - (33%) Gaps:222/552 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GSAGSAESATTTSTALSSGS----------TGSSTVNGGGSSTSGTEHLHSHHSLHDSSSSVSIS 127
            |||.|.:|:.........|:          ||:|...||||...|         |:.........
Human    65 GSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPG---------LNSEQQPPQPP 120

  Fly   128 PAISSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSM 192
            |...:|.|         |:..:..||         ||...||..|                    
Human   121 PPPPTLPP---------SSPTNPGGG---------VPAKKPKGGP-------------------- 147

  Fly   193 TAVANSLDSTHLNNFQTSSTSSISNR----SRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGE 253
                |:          :||:::||.:    .::.:..::..|.                ..|:||
Human   148 ----NA----------SSSSATISKQIFPWMKESRQNSKQKNS----------------CATAGE 182

  Fly   254 EPKNDKK--NKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRR 316
            ..: ||.  ....:|.||.:||.||.|||..|..|||.....|.|:|...||||.::::||:|||
Human   183 SCE-DKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRR 246

  Fly   317 AKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPL 381
            .|::|.::                        |...|:            ||....|...|  ||
Human   247 MKYKKDQK------------------------AKGILH------------SPASQSPERSP--PL 273

  Fly   382 GSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPA----N 442
            |                 ||:|..........:||.            |..||.|   ||    .
Human   274 G-----------------GAAGHVAYSGQLPPVPGL------------AYDAPSP---PAFAKSQ 306

  Fly   443 PYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYTGVGVTD 507
            |.||..||   .::.:||.:.    :.|::|     :|...|.|:: ||..|.::....|..|  
Human   307 PNMYGLAA---YTAPLSSCLP----QQKRYA-----APEFEPHPMA-SNGGGFASANLQGSPV-- 356

  Fly   508 VVXENALGALLNQHQHHLQHFSGGSVGGSGVP-NGMQQHSGNMLHHSNLGLDHSDLGLVGGGPSN 571
                                :.||:...|..| :|...:.|::.|.|:..:|:|....:   |.|
Human   357 --------------------YVGGNFVESMAPASGPVFNLGHLSHPSSASVDYSCAAQI---PGN 398

  Fly   572 HQD------------EGNHSLEGSNKSPMEAP 591
            |..            ..:||.:|  :.| |||
Human   399 HHHGPCDPHPTYTDLSAHHSSQG--RLP-EAP 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 27/55 (49%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 34/206 (17%)
Antp-type hexapeptide 160..165 0/4 (0%)
Homeodomain 195..251 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 12/81 (15%)
DUF4074 369..430 CDD:463833 16/65 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432 7/31 (23%)
Blue background indicates that the domain is not in the aligned region.

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