DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and HOXC6

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_004494.1 Gene:HOXC6 / 3223 HGNCID:5128 Length:235 Species:Homo sapiens


Alignment Length:216 Identity:52/216 - (24%)
Similarity:76/216 - (35%) Gaps:58/216 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 SLSHLHHSAGQDLVGGYSQHPHHTVVPP-----------------HTPKHEPLEKLRIWAETGDF 185
            ||| .|.:.|||::...:.  :.|...|                 .||.:.|.|.:...:..|.:
Human     9 SLS-CHLAGGQDVLPNVAL--NSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVFSSSRGPY 70

  Fly   186 ----RDSHSSMTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDE 246
                ...:.....::|...:|..:|.|||.....|                       |..|...
Human    71 DYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQDFS-----------------------SEQGRTA 112

  Fly   247 PMTTSGE---EPKNDKKNKR--------QRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMW 300
            |......   .|...:.|..        :||.|..::..|..|||..|..|||.....|.|||..
Human   113 PQDQKASIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANA 177

  Fly   301 TNLTEARVRVWFKNRRAKWRK 321
            ..|||.::::||:|||.||:|
Human   178 LCLTERQIKIWFQNRRMKWKK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 25/55 (45%)
HOXC6NP_004494.1 Antp-type hexapeptide 122..127 1/4 (25%)
Homeodomain 142..198 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..235
Blue background indicates that the domain is not in the aligned region.

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