DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptx1 and CG11085

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster


Alignment Length:443 Identity:88/443 - (19%)
Similarity:121/443 - (27%) Gaps:235/443 - (53%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SAVGGCGGGGGLGVGVVTSSATALGPGGLTNGGGGVVSGALNGLEAMSAESTGLCLQDLVSAGTA 69
            ||..|.|.|.|.|.|         |.||   |||||.|    ||.|.:|           :||.|
  Fly    76 SATRGPGSGTGSGGG---------GGGG---GGGGVAS----GLSAAAA-----------AAGVA 113

  Fly    70 NGAGSAGSAESATTTSTALSSGSTGSSTVNGGGSSTSGTEHLHSHHSLHDSSSSVSISPAISSLM 134
            .|            ...|.:||:.|....|||....||                           
  Fly   114 AG------------LLAAAASGANGDRDANGGSGPGSG--------------------------- 139

  Fly   135 PISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSL 199
                       .|..  |||::|                 ||:                      
  Fly   140 -----------GGTS--GGYAEH-----------------KLQ---------------------- 152

  Fly   200 DSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQ 264
                                                            ::.||.:|         
  Fly   153 ------------------------------------------------LSKSGRKP--------- 160

  Fly   265 RRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRK----RERN 325
            ||:||.||..||..||..|...:|..::.|.::|...||:|.:|:.|::|||.||::    |...
  Fly   161 RRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQ 225

  Fly   326 AMNAAVAAADF-------KSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGS 383
            ..:.|....||       ..|.|.                      .||.|.:.           
  Fly   226 LRHQATMEKDFVVQDGGGAGGLGC----------------------CPSGLSSS----------- 257

  Fly   384 MVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCP 436
                         |:..|:..|.:.|..:.|..:..:::..  |||.|.. ||
  Fly   258 -------------FSAAAAAAAAASNPCNFLTSAAAAAIFR--NVGYVHG-CP 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 24/55 (44%)
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 24/55 (44%)

Return to query results.
Submit another query.