DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptx1 and HOXA3

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_109377.1 Gene:HOXA3 / 3200 HGNCID:5104 Length:443 Species:Homo sapiens


Alignment Length:434 Identity:100/434 - (23%)
Similarity:140/434 - (32%) Gaps:170/434 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 SSTSSISNRSRDRKDGNRS----VNETTI-------KTENISSSGHDEPMTTSGEEPKNDKKNKR 263
            ||.|...|.|.:....|.:    :|..|:       ..|:..::......::|||....||....
Human   123 SSASPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSSSSSGESCAGDKSPPG 187

  Fly   264 Q---RRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERN 325
            |   :|.||.:||.||.|||..|..|||.....|.|:|...||||.::::||:|||.|::|.:: 
Human   188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK- 251

  Fly   326 AMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHH 390
                         |.|                      .:.|..|..|...||.|          
Human   252 -------------GKG----------------------MLTSSGGQSPSRSPVPP---------- 271

  Fly   391 QNSVNCFNTGASGVAVSM----NNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPAN------PYM 445
                     ||.|...||    |:....|.|                |.|::.|..      |..
Human   272 ---------GAGGYLNSMHSLVNSVPYEPQS----------------PPPFSKPPQGTYGLPPAS 311

  Fly   446 YRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYTGVGVTDVVX 510
            |.::...|                         :|  .|.|..|..:||..|     .|..|   
Human   312 YPASLPSC-------------------------AP--PPPPQKRYTAAGAGA-----GGTPD--- 341

  Fly   511 ENALGALLNQHQHHLQ--------HFSGGS--VGGSGVPNGMQQHSGNML-------HHSNLGLD 558
                   .:.|.|.||        |..|..  ||||.|.  ...:||..|       |.::..:|
Human   342 -------YDPHAHGLQGNGSYGTPHIQGSPVFVGGSYVE--PMSNSGPALFGLTHLPHAASGAMD 397

  Fly   559 HSDLGLVGGG-----------PSNHQDEGNHSLEGSNKSPMEAP 591
            :...|.:|.|           |:.....|:|..:|..:   |||
Human   398 YGGAGPLGSGHHHGPGPGEPHPTYTDLTGHHPSQGRIQ---EAP 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 27/55 (49%)
HOXA3NP_109377.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..147 6/23 (26%)
Antp-type hexapeptide 155..160 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..196 8/36 (22%)
Homeodomain 192..248 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 247..338 30/193 (16%)
DUF4074 377..441 CDD:463833 15/65 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..443 10/42 (24%)

Return to query results.
Submit another query.