DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Arx

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001093644.1 Gene:Arx / 317268 RGDID:1562672 Length:566 Species:Rattus norvegicus


Alignment Length:521 Identity:136/521 - (26%)
Similarity:196/521 - (37%) Gaps:137/521 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GPGGLTNGGGGVVSGALNGLEAMSAESTGLCLQDLVSAGTANGAGSAGSAESATTTSTALSSGST 93
            ||||                        |..||   .|..|..|.:|.:|.:||.|.||   |..
  Rat    90 GPGG------------------------GRLLQ---GAAAAAAAAAAAAAAAATATGTA---GPR 124

  Fly    94 GSSTVNGGGSSTSGTEHLHSHHSLHDSSSSVSISPA-------ISSLMPIS-SLSHLHHSAGQDL 150
            |........::..|..        .||:.:|:.:.|       ||....:| |.|..:...|...
  Rat   125 GEVPPPPPPAARPGER--------QDSAGAVAAAAAAAWDTLKISQAPQVSISRSKSYRENGAPF 181

  Fly   151 V------------GGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLDSTH 203
            |            ||.: ||...:.....|...|    .....||...|....:....:..:...
  Rat   182 VPPPPALDELGGPGGVA-HPEERLSAASGPGSAP----AAGGGTGTEEDEEELLEDEEDEDEEEE 241

  Fly   204 LNNFQTSSTSSISNRSRD-RKDGNRSVNETT---------------IKTENISSS---------- 242
            |  .:......:.:.:|. .|:..|....||               :.||....|          
  Rat   242 L--LEDDEEELLEDDARALLKEPRRCSVATTGTVAAAAAAAAAAAAVATEGGELSPKEELLLHPE 304

  Fly   243 ------GHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWT 301
                  |.|....::|.:.:.....::|||.||.|||.||:|||..|.:..|||:.||||:||..
  Rat   305 DAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 369

  Fly   302 NLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGF-GTQFMQPFADDSLYSSYPY-----N 360
            :||||||:|||:||||||||||:...........|.... .|..:.|:.|.|.:.  |:     :
  Rat   370 DLTEARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPGPLSATHPLSPYLDASPFP--PHHPALDS 432

  Fly   361 NWT-----------KVPSPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASML 414
            .||           .:|.|.|:...|....|||           ::.|    .|.||..:.|.:.
  Rat   433 AWTAAAAAAAAAFPSLPPPPGSASLPPSGAPLG-----------LSTF----LGAAVFRHPAFIS 482

  Fly   415 P--GSMGSSLSNTSNVGAVGAPCPYTTPANPYMYRSA--AEPCMSSS--MSSSIATLRLKAKQHA 473
            |  |.:.|:::..::.....|.....|||......|.  |:|..:::  .:||||.||||||:||
  Rat   483 PAFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVASGALADPATAAADRRASSIAALRLKAKEHA 547

  Fly   474 S 474
            :
  Rat   548 A 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 37/55 (67%)
ArxNP_001093644.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..264 28/162 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..319 5/32 (16%)
Homeodomain 333..389 CDD:459649 37/55 (67%)
OAR 530..548 CDD:461067 11/17 (65%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 534..547 10/12 (83%)
Blue background indicates that the domain is not in the aligned region.

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