DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and vsx1

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_571408.1 Gene:vsx1 / 30598 ZFINID:ZDB-GENE-990415-205 Length:344 Species:Danio rerio


Alignment Length:367 Identity:94/367 - (25%)
Similarity:129/367 - (35%) Gaps:115/367 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 STVNGGGSSTSGTEHLHSHHSLHDSSSSVSISPAISSLMPISSLSHLHHSA--------GQD-LV 151
            |.:||.|..:.|.                    ||:.|:.:.|....|.|.        ||. .|
Zfish    25 SRLNGSGFRSKGF--------------------AITDLLGLESELQPHQSGPGAGPNGEGQSAAV 69

  Fly   152 GGYS------------------QHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANS 198
            ||:|                  |.|  ...|...|.|.||.:.|        .:||         
Zfish    70 GGFSFPGGSLPLGLGFLCSLAAQQP--PGAPCFLPSHIPLLQSR--------TESH--------- 115

  Fly   199 LDSTHLNNF--QTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKN 261
                .:.|.  |....|.....|.||.||..|.|                            .:.
Zfish   116 ----FMQNLEQQRDVYSDDDCLSGDRNDGKNSGN----------------------------SQK 148

  Fly   262 KRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNA 326
            :::||.||.|||.||:|||..|:...|||:..||.:||.|.|.|.|::|||:||||||||||:..
Zfish   149 RKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCW 213

  Fly   327 MNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHHQ 391
            ..::|.|.....|...:...|..:..:.|:         .|.:.....||.:.....|     |:
Zfish   214 GRSSVMAEYGLYGAMVRHSIPLPESIINSA---------KSGMMGSCAPWLLGEPAGM-----HK 264

  Fly   392 NSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGA 433
            .|:..... |.|...|.::.:......|.....|.:.||.||
Zfish   265 KSMEIVKK-APGTPESTHSDTYSEEHKGKDSDTTWSSGANGA 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 33/55 (60%)
vsx1NP_571408.1 Octapeptide motif 37..44 3/26 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..70 4/20 (20%)
COG5576 101..>221 CDD:227863 55/168 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..156 10/56 (18%)
Nuclear localization signal. /evidence=ECO:0000269|PubMed:11331779 147..151 0/3 (0%)
Homeodomain 152..208 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..344 9/33 (27%)

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