DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and dlx5a

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_571381.2 Gene:dlx5a / 30569 ZFINID:ZDB-GENE-990415-49 Length:282 Species:Danio rerio


Alignment Length:196 Identity:49/196 - (25%)
Similarity:74/196 - (37%) Gaps:50/196 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 SSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLT 304
            |.....|..|...|....:.|.|:.|:.||.::|.||..|:..|...:|..:..|.|:|....||
Zfish   113 SQPSPQEKETAEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLT 177

  Fly   305 EARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPL 369
            :.:|::||:|:|:|.:|             ..|:|.......|.:.|.:..:.|.:         
Zfish   178 QTQVKIWFQNKRSKLKK-------------IMKNGELPPEHSPSSSDPMACNSPQS--------- 220

  Fly   370 GTKPFPW----PVNPLGSMVAGNHHQNSVNCFNTGASGVAVS-----------MNNASMLPGSMG 419
               |..|    |..|        |||  ....||.||....|           ||:....||::.
Zfish   221 ---PAVWDSQGPQRP--------HHQ--PQNINTAASTFLESASSSWYSSTGAMNSHLQAPGTLH 272

  Fly   420 S 420
            |
Zfish   273 S 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 20/55 (36%)
dlx5aNP_571381.2 DLL_N 31..117 CDD:463567 1/3 (33%)
Homeodomain 138..194 CDD:459649 20/55 (36%)

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