DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and otx2b

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_571326.1 Gene:otx2b / 30501 ZFINID:ZDB-GENE-980526-406 Length:289 Species:Danio rerio


Alignment Length:277 Identity:87/277 - (31%)
Similarity:119/277 - (42%) Gaps:68/277 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 MTTSGEE--------PKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLT 304
            :||||.:        |...:|   |||:||.||..||..||..|::.||||:..|||:|:..||.
Zfish    17 LTTSGMDLLHPSVGYPATPRK---QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLP 78

  Fly   305 EARVRVWFKNRRAKWRKRERNAMN-------------AAVAAADFKSGFGTQFMQPFADDSLYSS 356
            |:||:|||||||||.|::::...|             :....|..:||...||..|.:     :|
Zfish    79 ESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKSSPAREASSESGASGQFTPPSS-----TS 138

  Fly   357 YPYNNWTKVP----SPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGS 417
            .|..:.|..|    ||....|...|::...|.:     |.|.....|.|||.:         .|.
Zfish   139 VPAISTTTAPVSIWSPASISPLSDPLSTSSSCM-----QRSYPMTYTQASGYS---------QGY 189

  Fly   418 MGSSLSNTSNVGAVGAPC-PYTTPANPYMYRSAAEPCMS-SSMSSSIATLRLKAKQHASAGFGSP 480
            .||    ||..|  |..| .|.||    |:.....|..: |.|||:..|..|..         ||
Zfish   190 AGS----TSYFG--GMDCGSYLTP----MHHQLTGPGSTLSPMSSNAVTSHLNQ---------SP 235

  Fly   481 YSAPSPVSRSNSAGLSA 497
            .|.|:....::..|.::
Zfish   236 ASLPTQGYGASGLGFNS 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 33/55 (60%)
otx2bNP_571326.1 Homeodomain 39..94 CDD:459649 33/54 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..142 10/53 (19%)
TF_Otx 153..234 CDD:427350 30/113 (27%)

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