DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and rx3

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_571302.1 Gene:rx3 / 30474 ZFINID:ZDB-GENE-990415-238 Length:292 Species:Danio rerio


Alignment Length:275 Identity:82/275 - (29%)
Similarity:124/275 - (45%) Gaps:51/275 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 FQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHF 271
            :.:..|...:.....:||.|:..:.....|..:|.   |.|....|:...::...|:.||.||.|
Zfish    52 YGSGKTGKDTEHLSPKKDSNKHFDGVCRSTVMVSP---DLPDADGGKLSDDENPKKKHRRNRTTF 113

  Fly   272 TSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADF 336
            |:.||.|||..|.::.|||:.:|||:|:..||.|.||:|||:|||||||::|:      :..:..
Zfish   114 TTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQEK------LEVSSI 172

  Fly   337 KSGFGTQFMQPFADD-SLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTG 400
            |....:....|.:.. ||.|..|...|  :..|:.|..     :||.|:.:          |.|.
Zfish   173 KLQESSMLSIPRSGPLSLGSGLPLEPW--LTGPISTSS-----SPLQSLPS----------FITP 220

  Fly   401 ASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPANPYMYR--------SAAEPCMSSS 457
            ...|.     ||..|....||.:...::..:||.||      ||...        ..|:|     
Zfish   221 QQAVP-----ASYTPPQFLSSSTLNHSLPHIGAVCP------PYQCSGFMDKFSLQEADP----- 269

  Fly   458 MSSSIATLRLKAKQH 472
            .::|||:||:|||:|
Zfish   270 RNTSIASLRMKAKEH 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 33/55 (60%)
rx3NP_571302.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
Octapeptide motif 32..39
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..72 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..107 5/24 (21%)
Homeodomain 107..163 CDD:459649 33/55 (60%)
OAR 268..284 CDD:461067 9/20 (45%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 272..285 9/13 (69%)
Nuclear localization signal. /evidence=ECO:0000255 278..282 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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