Protein Alignment Ptx1 and Cdx4

DIOPT Version :10

• Sequence 1: NP_001138130.2
• Gene: Ptx1 / 43664
• FlyBaseID: FBgn0020912
• Length: 610
• Species: Drosophila melanogaster
• Sequence 2: NP_001100412.1
• Gene: Cdx4 / 302400
• RGDID: 1561529
• Length: 288
• Species: Rattus norvegicus
• Alignment Length: 244
• Identity: 57/244 - (23%)
• Similarity: 101/244 - (41%)
• Gaps: 50/244 - (20%)

  Fly    99 NGGGSSTSGTEHLHSHHSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVV 163
            |.||.||:|                |..|....|.:|.|:.:      ...:...|..:||.:.:
  Rat    20 NPGGGSTAG----------------VGTSGGSGSPLPASNFT------AAPVYPHYMGYPHMSNM 62

  Fly   164 PPHTPKHEPLEKLRIWAET-GDFRDSHSSMTAVANSLDSTHLNNFQTS---------STSSISNR 218
            .||.|      .|..|:.. ...|:..|:....::::.:..:|:..:|         ||...:..
  Rat    63 DPHGP------SLGAWSSPYSPPREDWSTYPGPSSTMGTVPMNDMTSSSPAFGSPDYSTLGPTGG 121

  Fly   219 SRDRKDGNR---SVNETTIKTENISSSGHDEPMTTSGEEP--------KNDKKNKRQRRQRTHFT 272
            :....:|..   :.:|:.:..::.:|.|...| :.|...|        :...|.:.:.:.|..:|
  Rat   122 AGGASNGGSLPDAASESLVSIDSGTSGGATSP-SRSRHSPYAWMRKTVQVTGKTRTKEKYRVVYT 185

  Fly   273 SQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRK 321
            ..|..|||..|..|||..:..:.|:|:...|:|.:|::||:|||||.||
  Rat   186 DHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERK 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ptx1	NP_001138130.2	Homeodomain	265..321	CDD:459649	22/55 (40%)
Cdx4	NP_001100412.1	Caudal_act	13..174	CDD:461413	32/182 (18%)
		Homeodomain	179..234	CDD:459649	22/54 (41%)