DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and pitx2

DIOPT Version :9

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_571050.1 Gene:pitx2 / 30164 ZFINID:ZDB-GENE-990714-27 Length:314 Species:Danio rerio


Alignment Length:388 Identity:162/388 - (41%)
Similarity:203/388 - (52%) Gaps:97/388 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 ISSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTA 194
            ::|:....||.|.||:             ||..    ..||.||...             ||:..
Zfish     1 MTSMKDPLSLDHHHHN-------------HHVT----GSKHAPLSMA-------------SSLQP 35

  Fly   195 VANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDK 259
            :..|:||.|..:..|.|.:| |..|.:::.| :|.||          ..:|:|           .
Zfish    36 LQRSVDSKHRLDVHTVSDTS-SPESVEKEKG-QSKNE----------DSNDDP-----------S 77

  Fly   260 KNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRER 324
            |.|||||||||||||||||||.||.||||||||||||||:|||||||||||||||||||||||||
Zfish    78 KKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER 142

  Fly   325 NAMNAAVAAADFKSGFGTQF---MQPFADDSLYSSYPYNNWTK---VPSPLGTKPFPW----PVN 379
            |..     |...|:|||.||   |||:  |.:|.||.||||..   ..:.|.||.||:    .||
Zfish   143 NQQ-----AELCKNGFGPQFNGLMQPY--DDMYPSYTYNNWAAKGLTSASLSTKSFPFFNSMNVN 200

  Fly   380 PLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNV-------GAVGAPCPY 437
            ||.|....: ..||::..:..:|.|..::..   :|||..:||:|.:|:       |.....|||
Zfish   201 PLSSQTMFS-PPNSISSMSMSSSMVPSAVTG---VPGSSLNSLNNLNNLSNPSLNSGVPTPACPY 261

  Fly   438 TTPANPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQY 500
            ..|..||:||   :.|     :||:|:||||||||:|.|:.   |..:|.|     .||||||
Zfish   262 APPTPPYVYR---DTC-----NSSLASLRLKAKQHSSFGYA---SVQNPAS-----NLSACQY 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeobox 268..320 CDD:278475 48/51 (94%)
pitx2NP_571050.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 42/144 (29%)
Homeobox 86..138 CDD:278475 48/51 (94%)
OAR 272..289 CDD:281777 11/21 (52%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 276..289 10/12 (83%)
Nuclear localization signal. /evidence=ECO:0000255 282..286 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I5907
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55454
Inparanoid 1 1.050 219 1.000 Inparanoid score I3550
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1432356at2759
OrthoFinder 1 1.000 - - FOG0001767
OrthoInspector 1 1.000 - - otm26409
orthoMCL 1 0.900 - - OOG6_107540
Panther 1 1.100 - - O PTHR45882
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3409
SonicParanoid 1 1.000 - - X469
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1212.000

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