DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Pitx3

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_062120.1 Gene:Pitx3 / 29609 RGDID:3332 Length:302 Species:Rattus norvegicus


Alignment Length:282 Identity:123/282 - (43%)
Similarity:153/282 - (54%) Gaps:68/282 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 GEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRR 316
            |..|::....|:|||||||||||||||||.||.||||||||||||||:|||||||||||||||||
  Rat    50 GGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRR 114

  Fly   317 AKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNW--TKVPSPLGTKPFPWPVN 379
            |||||||| :..|.:....|.:..| ..:.|:  :.:|..|.|.||  ..:..||..|.||:..|
  Rat   115 AKWRKRER-SQQAELCKGGFAAPLG-GLVPPY--EEVYPGYTYGNWPPKALAPPLAAKTFPFAFN 175

  Fly   380 -----PLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAV----GAP- 434
                 ||.|...          |:..:|..|..:.:|:..||::       ...||:    ||| 
  Rat   176 SVNVGPLASQPV----------FSPPSSIAASMVPSAAAAPGTV-------PGPGALQGLGGAPP 223

  Fly   435 -------------CPYTTPA--------NPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFG 478
                         |||.:.|        :||:||   :||     :||:|:||||||||||  |.
  Rat   224 GLAPAAVSSGAVSCPYASAAAAAAAAASSPYVYR---DPC-----NSSLASLRLKAKQHAS--FS 278

  Fly   479 SPYSAPSPVSRSNSAGLSACQY 500
            .| :.|.|...:|   ||.|||
  Rat   279 YP-AVPGPPPAAN---LSPCQY 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 52/55 (95%)
Pitx3NP_062120.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 11/20 (55%)
Homeodomain 63..119 CDD:459649 52/55 (95%)
PTZ00395 <142..>236 CDD:185594 26/112 (23%)
OAR 258..275 CDD:461067 12/21 (57%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 262..275 10/12 (83%)
Nuclear localization signal. /evidence=ECO:0000255 268..272 3/3 (100%)

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