DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Otp

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001093993.1 Gene:Otp / 294640 RGDID:727945 Length:325 Species:Rattus norvegicus


Alignment Length:297 Identity:85/297 - (28%)
Similarity:133/297 - (44%) Gaps:80/297 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 TSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTS 273
            |.::.::|.:..|::.|.:.       ..|.|.:|..:     |::        :|:|.||.||.
  Rat    69 TPASLAVSAKDPDKQPGPQG-------GPNPSQAGQQQ-----GQQ--------KQKRHRTRFTP 113

  Fly   274 QQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNA------------ 326
            .||.|||.:|::..|||:..|||:|:...|||:||:|||:||||||:||::..            
  Rat   114 AQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPT 178

  Fly   327 ------MNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLG--- 382
                  .:||.|||   :..|.......|:|:        .|.....| |....|.| ..||   
  Rat   179 PGLPQFPSAAAAAA---AAMGDSLCSFHANDT--------RWAAAAMP-GVSQLPLP-PALGRQQ 230

  Fly   383 ---------SMVAGNHHQNSVNCFNT--GASGVAVSMN-NASMLPGSMGSSLSNTSNVGAVGAPC 435
                     |:.|| ...||:...|:  |::|..:..: .....||.:.:||...|||.  |:|.
  Rat   231 AMAQSLSQCSLAAG-PPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVS--GSPQ 292

  Fly   436 PYTTPANPYMYRSAAEPCMSSSMSSSIATLRLKAKQH 472
            ..::|.:..::|           .:|||:||.||.:|
  Rat   293 LCSSPDSSDVWR-----------GTSIASLRRKALEH 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 32/55 (58%)
OtpNP_001093993.1 Homeodomain 106..156 CDD:459649 27/49 (55%)
OAR 303..320 CDD:461067 9/27 (33%)

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