DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Mixl1

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_063128236.1 Gene:Mixl1 / 289311 RGDID:1310011 Length:245 Species:Rattus norvegicus


Alignment Length:214 Identity:63/214 - (29%)
Similarity:86/214 - (40%) Gaps:82/214 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 TTSGEEPKNDKKNKR-----QRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARV 308
            |.:|.:|....|...     |||:||.|:|:|||.||..|.:..|||:..||.:|..|.|.|:|:
  Rat    66 TPTGLDPPGPSKGSAAPSAPQRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRI 130

  Fly   309 --------------RVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPY 359
                          :|||:|||||.|:               :||...|.:....:|.|:.    
  Rat   131 QLNSFFFFFNPLVPQVWFQNRRAKSRR---------------QSGKSFQPLSSRREDFLHR---- 176

  Fly   360 NNWTKVPSPLGTK--------PFPWPVN-PLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLP 415
                  |:| ||:        |....|| .|.|.:||              .||..|        
  Rat   177 ------PAP-GTEARCLKPQLPLEADVNHVLDSSMAG--------------GGVCTS-------- 212

  Fly   416 GSMG----SSLSNTSNVGA 430
            ||.|    ||||  .::|:
  Rat   213 GSQGFETYSSLS--EDIGS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 30/69 (43%)
Mixl1XP_063128236.1 None

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