DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and sebox

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_068077188.1 Gene:sebox / 282666 ZFINID:ZDB-GENE-021206-4 Length:333 Species:Danio rerio


Alignment Length:317 Identity:73/317 - (23%)
Similarity:121/317 - (38%) Gaps:99/317 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 TTIKTENISSS------GHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPD 290
            |.:.|:::.||      ||.|               .:::|:||.|:..||.|||..|....|||
Zfish    75 TDVTTKHMLSSPELDRTGHVE---------------GQRKRKRTIFSRAQLSELERAFMITPYPD 124

  Fly   291 MSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYS 355
            ::.||.:|..|.|.|::::|||:||||:..|.::     .:.....:|        |..|.:..:
Zfish   125 ITLRERLAALTLLPESKIQVWFQNRRARSMKSKK-----LITPVSRRS--------PAKDCTFPA 176

  Fly   356 SYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHHQNS-----VNCFNTGASGVAVSM------- 408
            ::|..|..:  ||...|..             .|||.|     :|.:......::..:       
Zfish   177 THPDLNLEQ--SPEANKSL-------------RHHQQSLIRQALNPWPQNRPPISPDLPEILQWA 226

  Fly   409 NNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPANPYMYRS---------AAEP------CMSSSM 458
            |..|..||.  ||.|:          ||.....:|:..:|         ||.|      |.:|..
Zfish   227 NRNSETPGD--SSFSS----------CPSERIQHPFPNQSSSVWQMNCFAAHPEGLKSYCTTSQA 279

  Fly   459 SSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYTGVG-VTDVVXENAL 514
            ..|..::......|       |.|....:.|.   .|:....|.:| ::|:: :.|:
Zfish   280 LYSSVSVDQMIPAH-------PSSLEEALQRQ---ALTHYPQTSLGDISDLIYKAAV 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 26/55 (47%)
seboxXP_068077188.1 COG5576 53..199 CDD:227863 45/166 (27%)
Homeodomain 99..152 CDD:459649 25/52 (48%)

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