DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Otx1

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_037241.2 Gene:Otx1 / 25646 RGDID:3237 Length:355 Species:Rattus norvegicus


Alignment Length:387 Identity:99/387 - (25%)
Similarity:140/387 - (36%) Gaps:114/387 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 KRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNA 326
            ::|||:||.||..||..||..|::.||||:..|||:|:..||.|:||:|||||||||.|:::   
  Rat    36 RKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ--- 97

  Fly   327 MNAAVAAADFKSGFGT----------------------QFMQPFADDSLYSSYPYNNWTKVPSPL 369
                      :||.||                      ||..|....|..||...::.:      
  Rat    98 ----------QSGNGTKSRPVKKKSSPVRESSGSESSGQFTPPAVSSSASSSSSASSAS------ 146

  Fly   370 GTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGS--SLSNTSNVGAVG 432
                    .||..:..||           .|.:.||.:.:.::....|:.|  |:|..|...:|.
  Rat   147 --------ANPAAAAAAG-----------LGGNPVAAASSLSTPTASSIWSPASISPGSAPASVS 192

  Fly   433 APCPYTTPANPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAG--FGSPYSAPSPVSRSNSAGL 495
            .|.|...|:|        ..||..|:::..||...........|  :|..|.||   |.|...|:
  Rat   193 VPEPLGAPSN--------ASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAP---SSSYFGGV 246

  Fly   496 SACQYTGVGVTDVVXENALGALLNQHQHHLQHFSGGSVGGSGVPNGMQQHSGNMLHHSNLGLDHS 560
            ....|                |...|.||..|...        |......:|:..||.:.   |.
  Rat   247 DCSSY----------------LAPMHSHHHPHQLS--------PMAPSSMAGHHHHHPHA---HH 284

  Fly   561 DLGLVGGGPSNHQDEGNHSLEGSN------------KSPMEAPLANSSNNNNNDNDDEDVID 610
            .|....|...:|....:|...|.:            |.|..|..:::...|.|..|..|..|
  Rat   285 PLSQSSGHHHHHHHHHHHQGYGGSGLAFNSADCLDYKEPAAAAASSAWKLNFNSPDCLDYKD 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 33/55 (60%)
Otx1NP_037241.2 Homeodomain 39..95 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..144 12/64 (19%)
TF_Otx 178..274 CDD:427350 29/130 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..306 12/59 (20%)

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