Protein Alignment Ptx1 and Hoxc6

DIOPT Version :10

• Sequence 1: NP_001138130.2
• Gene: Ptx1 / 43664
• FlyBaseID: FBgn0020912
• Length: 610
• Species: Drosophila melanogaster
• Sequence 2: XP_063119084.1
• Gene: Hoxc6 / 252885
• RGDID: 620626
• Length: 264
• Species: Rattus norvegicus
• Alignment Length: 226
• Identity: 58/226 - (25%)
• Similarity: 88/226 - (38%)
• Gaps: 49/226 - (21%)

  Fly   126 ISPAISSLMPISSLSHL-HHSA---GQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFR 186
            |.|........|..|:: .||.   |:....|: ||.|..:.||..|:....|:          :
  Rat    13 IDPKFPPCEEYSQNSYIPEHSPEYYGRTRESGF-QHHHQELYPPPPPRPSYPER----------Q 66

  Fly   187 DSHSSMTAVANS-------LDSTHLNNFQ-TSSTSSISNRSRDRKDGNRSVNETTIKTENISSSG 243
            .|.:|:....||       ....|....| ....:.:|..|........:.::..  .::.||:.
  Rat    67 YSCTSLQGPGNSRAHGPAQAGHHHPEKSQPLCEPAPLSGASASPSPAPPACSQPA--PDHPSSAA 129

  Fly   244 HDEPM---------------TTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMST 293
            ..:|:               ..:|.|||         |.||.:|.||:.|||..|..|||.....
  Rat   130 SKQPIVYPWMKKIHVSTVNPNYNGGEPK---------RSRTAYTRQQVLELEKEFHYNRYLTRRR 185

  Fly   294 REEIAMWTNLTEARVRVWFKNRRAKWRKRER 324
            |.|||....|:|.::::||:|||.||:|..|
  Rat   186 RIEIAHSLCLSERQIKIWFQNRRMKWKKDHR 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ptx1	NP_001138130.2	Homeodomain	265..321	CDD:459649	26/55 (47%)
Hoxc6	XP_063119084.1	None