DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptx1 and Alx1

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001408403.1 Gene:Alx1 / 216285 MGIID:104621 Length:377 Species:Mus musculus


Alignment Length:382 Identity:103/382 - (26%)
Similarity:143/382 - (37%) Gaps:135/382 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 PHTPKHEPLEKLRIWAETGDFRDS--HSSMTAVANSLDSTHL-------NNFQTSSTSSISNRSR 220
            |....|..|::      |...:||  :..:|.|......|.|       ||.:.|....:..:|.
Mouse    57 PRAEHHVRLDR------TSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNNLRMSPVKGMPEKSE 115

  Fly   221 DRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSR 285
            ..:.|::.       ..|:|||                    ::||.||.|||.||:|||..|.:
Mouse   116 LDELGDKC-------DSNVSSS--------------------KKRRHRTTFTSLQLEELEKVFQK 153

  Fly   286 NRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQF---MQP 347
            ..|||:..||::|:.|.||||||:|||:|||||||||||...     ....||.|...:   :.|
Mouse   154 THYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQ-----IQQAKSHFAATYDISVLP 213

  Fly   348 FADDSLYSSYPY---NNWT------------KVPSPLGTKPFPWPVNPL--GSMVAGNHHQNSVN 395
            ..|     |||.   |.|.            .:|....:...|:..:|.  .|....::|||..:
Mouse   214 RTD-----SYPQIQNNLWAGNASGGSVVTSCMLPRDASSCMTPYSHSPRTDSSYTGFSNHQNQFS 273

  Fly   396 CFNTGASGVAVSMNN---ASMLPGSMGSSLSNTSNVGAVGAPCPYTTPANPYMYRSAAEPCMSSS 457
                     .|.:||   .|:|.|:                       .|.:.:.:..|   ...
Mouse   274 ---------HVPLNNFFTDSLLTGA-----------------------TNGHAFETKPE---FER 303

  Fly   458 MSSSIATLRLKAKQHAS-----------------------AGFGSPYSAPSPVSRSN 491
            .|||||.||:|||:|.:                       |||  ..|.|||....|
Mouse   304 RSSSIAVLRMKAKEHTANISWAMFDITVHSLLPGQCLHIPAGF--LLSHPSPPGLMN 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 35/55 (64%)
Alx1NP_001408403.1 Homeodomain 133..189 CDD:459649 35/55 (64%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:Q63087 192..326 37/178 (21%)
OAR 302..320 CDD:461067 11/17 (65%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319 9/12 (75%)

Return to query results.
Submit another query.