DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Shox2

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_038693.1 Gene:Shox2 / 20429 MGIID:1201673 Length:331 Species:Mus musculus


Alignment Length:501 Identity:124/501 - (24%)
Similarity:161/501 - (32%) Gaps:248/501 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DRSS-AVGGCGGGGGLGVGVVTSSATALGPGGLTNGGGGVVSGALNGLEAMSAESTGLCLQDLVS 65
            |||| ||...|||||.|.|         |.||   ||||                          
Mouse    49 DRSSPAVRAAGGGGGAGGG---------GGGG---GGGG-------------------------- 75

  Fly    66 AGTANGAGSAGSAESATTTSTALSSGSTGSSTVNGGGSSTSGTEHLHSHHSLHDSSSSVSISPAI 130
             |.|.|.|:.|.|                     |||.|                          
Mouse    76 -GGAGGGGAGGGA---------------------GGGRS-------------------------- 92

  Fly   131 SSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAV 195
                |:..|         |:  |.::....    |.:|:                      :|.|
Mouse    93 ----PVREL---------DM--GAAERSRE----PGSPR----------------------LTEV 116

  Fly   196 ANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKK 260
            :..|                    :||||                        ...|.|.:...|
Mouse   117 SPEL--------------------KDRKD------------------------DAKGMEDEGQTK 137

  Fly   261 NKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERN 325
            .| |||.||:||.:||.|||..|....|||...|||::....|:||||:|||:|||||.||:| |
Mouse   138 IK-QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQE-N 200

  Fly   326 AMNAAV---AAADFKS-------GFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNP 380
            .::..|   ||:.|::       ..|...| ||..||..:..|.:  .:|.:.|          .
Mouse   201 QLHKGVLIGAASQFEACRVAPYVNVGALRM-PFQQDSHCNVTPLS--FQVQAQL----------Q 252

  Fly   381 LGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTT-PANPY 444
            |.|.||..||....:                                   :.|..||.. ||.|:
Mouse   253 LDSAVAHAHHHLHPH-----------------------------------LAAHAPYMMFPAPPF 282

  Fly   445 ---------------MYRSAAEPCMSSSMSSSIATLRLKAKQHASA 475
                           ...:||....::|.:||||.||||||:||:|
Mouse   283 GLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRLKAKKHAAA 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 31/55 (56%)
Shox2NP_038693.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..140 47/262 (18%)
Homeodomain 141..197 CDD:459649 31/55 (56%)
OAR 311..327 CDD:461067 11/15 (73%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 313..326 10/12 (83%)
Blue background indicates that the domain is not in the aligned region.

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