DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptx1 and Prrx2

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_006497869.1 Gene:Prrx2 / 20204 MGIID:98218 Length:259 Species:Mus musculus


Alignment Length:130 Identity:26/130 - (20%)
Similarity:49/130 - (37%) Gaps:42/130 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KAPEQSAAAGSAAAAKKKHDWDKITKEIEKDDETKDDVSD------------------LFKKIYA 134
            |.|.||:..|..|.  :.|. :..|.|:||..:|||...:                  .|:.:..
Mouse    49 KDPTQSSRPGDVAV--EDHT-NLATAELEKQLQTKDSAPEQDFLARHTFMETQQVDAVTFEDVAV 110

  Fly   135 DASEDT------------RKAMMKSYYE---SGGTVLS---TNWAEVGAKQVEVKPPDGCEYKKW 181
            |.:::.            |:.|:::|..   .||.:..   .:|.|   ::||:...:....::|
Mouse   111 DFTQEEWTSLDPIQRTLYREVMLENYQNLATVGGQLFKPSLISWLE---RKVELTVMEQGILQEW 172

  Fly   182  181
            Mouse   173  172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649
Prrx2XP_006497869.1 Homeodomain 103..167 CDD:459649 11/66 (17%)
OAR 233..249 CDD:461067
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.