DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and ceh-30

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_508524.2 Gene:ceh-30 / 191620 WormBaseID:WBGene00000451 Length:237 Species:Caenorhabditis elegans


Alignment Length:233 Identity:58/233 - (24%)
Similarity:103/233 - (44%) Gaps:30/233 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 SSMTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEE 254
            ::...:|.:..::..|...:||:..||:......:.:...|:.....::|.|.....|..:|   
 Worm    19 TTQALLAQAASTSPCNKISSSSSFRISDILEQSPNNSSHSNDHDPSPQSIKSDFSTSPRASS--- 80

  Fly   255 PKNDKKN-----KRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKN 314
            |..|:..     |:.|:.||.||.:||||||:||.:.:|..:..|.::|....||:.:|:.|::|
 Worm    81 PGGDRMGSPGSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQN 145

  Fly   315 RRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTK--VPSPLGTKPFPWP 377
            ||.||:::..:.|:......:..           |..:|..|.||  |..  ...|:||: .|..
 Worm   146 RRTKWKRQATSGMDLLSEPGNLS-----------AVQNLIRSSPY--WANYITALPMGTQ-LPMM 196

  Fly   378 VNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLP 415
            ..|:..:|...|      .|...:|..:.|.:.:|..|
 Worm   197 GLPMSMIVPPAH------AFQPSSSSNSPSTHISSESP 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 25/55 (45%)
ceh-30NP_508524.2 Homeodomain 96..152 CDD:459649 25/55 (45%)

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