DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Pitx2

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001035967.1 Gene:Pitx2 / 18741 MGIID:109340 Length:324 Species:Mus musculus


Alignment Length:384 Identity:159/384 - (41%)
Similarity:195/384 - (50%) Gaps:103/384 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 HHSAGQDLVGGYSQHPHH-------TVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLD 200
            |.:||..|....|...||       :|:.|..|:                            |||
Mouse    12 HRAAGTKLSAASSPFCHHPQALAMASVLAPGQPR----------------------------SLD 48

  Fly   201 ST--HLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKR 263
            |:  .|.....|.|||.....:|:  |.:..||..         |.::|           .|.||
Mouse    49 SSKHRLEVHTISDTSSPEVAEKDK--GQQGKNEDV---------GAEDP-----------SKKKR 91

  Fly   264 QRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMN 328
            |||||||||||||||||.||.||||||||||||||:||||||||||||||||||||||||||.. 
Mouse    92 QRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ- 155

  Fly   329 AAVAAADFKSGFGTQF---MQPFADDSLYSSYPYNNWTK---VPSPLGTKPFPW----PVNPLGS 383
                |...|:|||.||   |||:  |.:|..|.||||..   ..:.|.||.||:    .||||.|
Mouse   156 ----AELCKNGFGPQFNGLMQPY--DDMYPGYSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSS 214

  Fly   384 MVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNV------GAVGAP-CPYTTPA 441
            ....: ..||::..:..:|.|..::..   :|||..:||:|.:|:      .||..| |||..|.
Mouse   215 QSMFS-PPNSISSMSMSSSMVPSAVTG---VPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPT 275

  Fly   442 NPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQY 500
            .||:||   :.|     :||:|:||||||||:|.|:.   |..:|.|     .||||||
Mouse   276 PPYVYR---DTC-----NSSLASLRLKAKQHSSFGYA---SVQNPAS-----NLSACQY 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 52/55 (95%)
Pitx2NP_001035967.1 Homeodomain 93..149 CDD:459649 52/55 (95%)
OAR 282..299 CDD:461067 11/21 (52%)

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