DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Pitx2

DIOPT Version :9

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001035967.1 Gene:Pitx2 / 18741 MGIID:109340 Length:324 Species:Mus musculus


Alignment Length:384 Identity:159/384 - (41%)
Similarity:195/384 - (50%) Gaps:103/384 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 HHSAGQDLVGGYSQHPHH-------TVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLD 200
            |.:||..|....|...||       :|:.|..|:                            |||
Mouse    12 HRAAGTKLSAASSPFCHHPQALAMASVLAPGQPR----------------------------SLD 48

  Fly   201 ST--HLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKR 263
            |:  .|.....|.|||.....:|:  |.:..||..         |.::|           .|.||
Mouse    49 SSKHRLEVHTISDTSSPEVAEKDK--GQQGKNEDV---------GAEDP-----------SKKKR 91

  Fly   264 QRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMN 328
            |||||||||||||||||.||.||||||||||||||:||||||||||||||||||||||||||.. 
Mouse    92 QRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ- 155

  Fly   329 AAVAAADFKSGFGTQF---MQPFADDSLYSSYPYNNWTK---VPSPLGTKPFPW----PVNPLGS 383
                |...|:|||.||   |||:  |.:|..|.||||..   ..:.|.||.||:    .||||.|
Mouse   156 ----AELCKNGFGPQFNGLMQPY--DDMYPGYSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSS 214

  Fly   384 MVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNV------GAVGAP-CPYTTPA 441
            ....: ..||::..:..:|.|..::..   :|||..:||:|.:|:      .||..| |||..|.
Mouse   215 QSMFS-PPNSISSMSMSSSMVPSAVTG---VPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPT 275

  Fly   442 NPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQY 500
            .||:||   :.|     :||:|:||||||||:|.|:.   |..:|.|     .||||||
Mouse   276 PPYVYR---DTC-----NSSLASLRLKAKQHSSFGYA---SVQNPAS-----NLSACQY 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeobox 268..320 CDD:278475 48/51 (94%)
Pitx2NP_001035967.1 COG5576 40..>149 CDD:227863 73/158 (46%)
Homeobox 96..149 CDD:365835 49/52 (94%)
OAR 282..299 CDD:367680 11/21 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I5928
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55454
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001767
OrthoInspector 1 1.000 - - otm42671
orthoMCL 1 0.900 - - OOG6_107540
Panther 1 1.100 - - O PTHR45882
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3409
SonicParanoid 1 1.000 - - X469
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.940

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