DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Pdx1

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_032840.1 Gene:Pdx1 / 18609 MGIID:102851 Length:284 Species:Mus musculus


Alignment Length:162 Identity:47/162 - (29%)
Similarity:72/162 - (44%) Gaps:27/162 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 EPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAK 318
            ||:.:|      |.||.:|..||.|||..|..|:|.....|.|:|:..||||..:::||:|||.|
Mouse   143 EPEENK------RTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMK 201

  Fly   319 WRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGS 383
            |:|.|....::...:    .|.|.:  :|..|.::.|.........:|.|.|..|...|......
Mouse   202 WKKEEDKKRSSGTPS----GGGGGE--EPEQDCAVTSGEELLAVPPLPPPGGAVPPGVPAAVREG 260

  Fly   384 MVAGNHHQNSVNCFNTGASGVAVSMNNASMLP 415
            ::               .||::||...:|:.|
Mouse   261 LL---------------PSGLSVSPQPSSIAP 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 26/55 (47%)
Pdx1NP_032840.1 Transactivation domain. /evidence=ECO:0000250 13..73
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..116
Antp-type hexapeptide 119..124
Homeodomain 148..204 CDD:459649 27/61 (44%)
Nuclear localization signal 198..204 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..284 19/97 (20%)
Blue background indicates that the domain is not in the aligned region.

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