DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Pax3

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001152992.1 Gene:Pax3 / 18505 MGIID:97487 Length:484 Species:Mus musculus


Alignment Length:336 Identity:106/336 - (31%)
Similarity:137/336 - (40%) Gaps:64/336 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 STSSISN--RSR-----------DRKDGNRSVNETTIKTENISSSGHDEPMTTSG----EEPKND 258
            |.||||.  ||:           :||:...|..:.....:.|.|.....|.:..|    .||...
Mouse   150 SVSSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLP 214

  Fly   259 KKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKR- 322
            .|.| |||.||.||::||:|||..|.|..|||:.||||:|....||||||:|||.||||:|||: 
Mouse   215 LKRK-QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 278

  Fly   323 ---ERNAMNAAVAAADFKSGFGTQFMQ--PFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPL- 381
               :..|.|..:     ..||....|.  |....|..|..|.:....|..|..|...|.|:.|. 
Mouse   279 GANQLMAFNHLI-----PGGFPPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPST 338

  Fly   382 --GSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGS---------MGSSLSN-----TSNVGA 430
              .|.:..|...:|..|..:...|  .|....|.:|.|         :|:.||.     .:|.|.
Mouse   339 VHQSTIPSNADSSSAYCLPSTRHG--FSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGG 401

  Fly   431 VGAPCPYTTPANPYM---YRSAAEPCMSSSMSSSIATLRLK-AKQHASAGFGSPYSAPSPVSRSN 491
            |    |: .|...|.   .....||..:.|.|.|   .||: .|...|.....||..|:    .:
Mouse   402 V----PH-QPQTDYALSPLTGGLEPTTTVSASCS---QRLEHMKNVDSLPTSQPYCPPT----YS 454

  Fly   492 SAGLSACQYTG 502
            :||.|....||
Mouse   455 TAGYSMDPVTG 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 35/55 (64%)
Pax3NP_001152992.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645 5/8 (63%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161 6/10 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 17/63 (27%)
Homeodomain 220..276 CDD:459649 35/55 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 10/41 (24%)
Pax7 347..391 CDD:403540 11/45 (24%)
Blue background indicates that the domain is not in the aligned region.

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