DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and dsc-1

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_510497.1 Gene:dsc-1 / 181599 WormBaseID:WBGene00001096 Length:310 Species:Caenorhabditis elegans


Alignment Length:289 Identity:73/289 - (25%)
Similarity:114/289 - (39%) Gaps:100/289 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LHSH------HSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQ-------DLVGGYSQHPHHTV 162
            ||:|      |.|.|.....::||..|:           |..||       |.:|  :|.||  :
 Worm    81 LHNHFQMSNQHYLSDFDCPTTVSPISSA-----------HETGQLPQLSPYDHIG--NQDPH--M 130

  Fly   163 VPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSL--DSTHLNNFQTSSTSSISNRSRDRKDG 225
            ..||                           |..||:  |:::..|    ::.|||..:    .|
 Worm   131 FSPH---------------------------AYGNSMIPDNSYFEN----ASRSISAPN----VG 160

  Fly   226 NRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPD 290
            |.::|.:.:.::|..|.|                   .:||.||:||..|...||.:|..:.|||
 Worm   161 NSTLNPSLMSSDNAQSCG-------------------GRRRFRTNFTELQSTFLEDSFKESHYPD 206

  Fly   291 MSTREEIAMWTNLTEARVRVWFKNRRAKWRKRE-------RN-AMNAAVAAADFKSGFGTQFMQP 347
            ...::.:|.:..:.|.|:.|||:|||||||::|       || :.:....:.||..     |...
 Worm   207 HKAKKYMADFLKIPEDRITVWFQNRRAKWRRKEHRQRDRTRNESFSGGSNSFDFAC-----FSAQ 266

  Fly   348 FADDSLYSSYPYNNWTKVPS-PLGTKPFP 375
            ..||...:.:|  |...:|: |:....||
 Worm   267 HPDDGPNAKHP--NSFGIPNQPMSLDQFP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 25/55 (45%)
dsc-1NP_510497.1 Homeodomain 181..237 CDD:459649 25/55 (45%)

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