DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and unc-30

DIOPT Version :9

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001021277.1 Gene:unc-30 / 178265 WormBaseID:WBGene00006766 Length:323 Species:Caenorhabditis elegans


Alignment Length:408 Identity:112/408 - (27%)
Similarity:154/408 - (37%) Gaps:128/408 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 SSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAV 195
            ::|..|......|:.....|| ...|..||:::|                       .||..:::
 Worm     6 ATLTAIHQQQQSHNRFSNPLV-CVGQLDHHSLLP-----------------------EHSISSSL 46

  Fly   196 ANSLDSTHLNNFQ-----TSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEP 255
            |....:.:..|:.     |..|:.:........|..:..::..:.|.:        |..::|...
 Worm    47 APLTHNPYAFNYSIPLPPTDITTKLPKLELLSLDVKQEQDDNHLDTSS--------PTDSTGNGS 103

  Fly   256 KNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWR 320
            .|..|.::.|||||||||.||.|||:.|||||||||:.|||||:|.:|||.||||||||||||||
 Worm   104 TNGGKIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKNRRAKWR 168

  Fly   321 KRERNAMNAAVAAADFKSGFGT-----QFMQPFA------------------DDSLYSS---YPY 359
            |||||.:        ..:|.||     |.:.|..                  |||..:|   |.|
 Worm   169 KRERNYV--------IDNGQGTTKVTAQSLDPLGSLQNTFPQTLLQSSSSQLDDSAVTSSSFYGY 225

  Fly   360 NN-WTKVP--SPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSS 421
            .. |.:.|  |......|.|.:.|....                      ......|.|.:..|.
 Worm   226 GGAWQQNPYYSRNNQTTFNWQIKPQDQF----------------------QFQTIPMSPTTATSR 268

  Fly   422 LSNTSNVGAVGAPCPYTTPANPYMYRSAAEPCMSSSMSSSIATLRLK--AKQHASAGFGSPYSAP 484
            .|..:|:    ||.|            .|:...|:|.:||...|:|.  .....|:..|.||   
 Worm   269 FSTAANL----APLP------------TAQAAFSTSATSSNDKLKLMDGLSNSLSSSLGQPY--- 314

  Fly   485 SPVSRSNSAGLSACQYTG 502
                       ..|||:|
 Worm   315 -----------QPCQYSG 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeobox 268..320 CDD:278475 41/51 (80%)
unc-30NP_001021277.1 Homeobox 116..168 CDD:278475 41/51 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159542
Domainoid 1 1.000 102 1.000 Domainoid score I4341
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001767
OrthoInspector 1 1.000 - - oto20309
orthoMCL 1 0.900 - - OOG6_107540
Panther 1 1.100 - - LDO PTHR45882
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3409
SonicParanoid 1 1.000 - - X469
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.870

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