DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptx1 and unc-4

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_496138.1 Gene:unc-4 / 174544 WormBaseID:WBGene00006744 Length:252 Species:Caenorhabditis elegans


Alignment Length:222 Identity:72/222 - (32%)
Similarity:107/222 - (48%) Gaps:31/222 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 IWAETGDFRDSHSSMTAVANSLD--STHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENIS 240
            |||   ||..|..: :.:.|..|  .|:|.:....|||| ..:|....|.|..:||         
 Worm    19 IWA---DFWKSQIN-SVLLNPSDGSETYLASDNGKSTSS-REQSTSPDDDNLLMNE--------- 69

  Fly   241 SSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTE 305
                |:.:....:....:...|| ||.||:|:..||:|||..|..:.|||:..||.:||..:|.|
 Worm    70 ----DDGIALEDDNDTGESAAKR-RRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLE 129

  Fly   306 ARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQ--PFADDSLYS-------SYPYNN 361
            :||:|||:||||||||||:|...::....|......|:.:.  ||:.||:.:       ..|...
 Worm   130 SRVQVWFQNRRAKWRKREQNRNGSSEIKKDDGEQMETKALPTFPFSIDSILAVSRVPRGRRPNAK 194

  Fly   362 WTKVPSPLGTKPFPWPVNPLGSMVAGN 388
            :.:|.:.....||..|:.|: :...||
 Worm   195 YPRVQACKNLSPFMIPLFPI-TQPGGN 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 31/55 (56%)
unc-4NP_496138.1 Homeodomain 89..145 CDD:459649 31/55 (56%)

Return to query results.
Submit another query.