DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Hoxa3

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_034582.1 Gene:Hoxa3 / 15400 MGIID:96175 Length:443 Species:Mus musculus


Alignment Length:512 Identity:121/512 - (23%)
Similarity:169/512 - (33%) Gaps:173/512 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SSTSGTEHLHSHHSLHDSSSSVSISPAISSLMPISSLSH-----LHHSAGQDLVGGYSQHP---- 158
            |:..||:.:..|.            ||.|...|.|:..|     |..:..:.|.|..||.|    
Mouse    36 SAALGTDGVEYHR------------PACSLQSPASAGGHPKTHELSEACLRTLSGPPSQPPGLGE 88

  Fly   159 -----------HHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMT--AVANSLDSTHLNNFQTS 210
                       .....||..|...|       |.|.......||::  ..|||       |...:
Mouse    89 PPLPPPPPQAAPPAPQPPQPPPQPP-------APTPAAPPPPSSVSPPQSANS-------NPTPA 139

  Fly   211 ST--SSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQ---RRQRTH 270
            ||  |.:.|.....|.....:.|:...|:..:|.      ::|||....||....|   :|.||.
Mouse   140 STAKSPLLNSPTVGKQIFPWMKESRQNTKQKTSG------SSSGESCAGDKSPPGQASSKRARTA 198

  Fly   271 FTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRER------NAMNA 329
            :||.||.|||..|..|||.....|.|:|...||||.::::||:|||.|::|.::      ::...
Mouse   199 YTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQ 263

  Fly   330 AVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHHQNSV 394
            :.:.:....|.|....   :..||.:|.||       .|....||..|..               
Mouse   264 SPSRSPVPPGAGGYLN---SMHSLVNSVPY-------EPQSPPPFSKPPQ--------------- 303

  Fly   395 NCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPANPYMYRSAAEPCMSSSMS 459
                 ||.|          ||.:            :..||.|...|..|...|..|      :.|
Mouse   304 -----GAYG----------LPPA------------SYPAPLPSCAPPPPPQKRYTA------AGS 335

  Fly   460 SSIATLRLKAKQHASAG---FGSPYSAPSPV--------SRSNSAGLSACQYTGVGVTDVVXENA 513
            .:..|.......|...|   :|:|:...|||        ..|||..|       .|:|       
Mouse   336 GAGGTPDYDPHAHGLQGNGSYGTPHLQGSPVFVGGSYVEPMSNSGPL-------FGLT------- 386

  Fly   514 LGALLNQHQHHLQHFSGGSV--GGSGVPNGMQQHSGN------------MLHHSNLG 556
                      ||.|.:..::  ||:| |.|...|.|.            ..||.:.|
Mouse   387 ----------HLPHTTSAAMDYGGTG-PLGSGHHHGPGPGEPHPTYTDLTAHHPSQG 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 27/55 (49%)
Hoxa3NP_034582.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..151 21/90 (23%)
Antp-type hexapeptide 156..161 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..197 9/39 (23%)
COG5576 <182..309 CDD:227863 45/166 (27%)
Homeodomain 193..249 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 248..354 28/163 (17%)
DUF4074 378..441 CDD:463833 18/80 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..443 8/33 (24%)

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