DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Rax

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_446130.1 Gene:Rax / 114213 RGDID:620371 Length:342 Species:Rattus norvegicus


Alignment Length:273 Identity:82/273 - (30%)
Similarity:113/273 - (41%) Gaps:76/273 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 ISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNL 303
            :..:..|..::...|.||     |:.||.||.||:.||.|||..|.::.|||:.:|||:|...||
  Rat   117 VGPAAGDSKLSEEEEPPK-----KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNL 176

  Fly   304 TEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSP 368
            .|.||:|||:|||||||::|:..:::                ....|..|.|             
  Rat   177 PEVRVQVWFQNRRAKWRRQEKLEVSS----------------MKLQDSPLLS------------- 212

  Fly   369 LGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNN--ASMLPGSMGSSLSNTSNVG-- 429
            ....|....:.|||...:|           :|..|.|:.:..  ...|||...::|.:....|  
  Rat   213 FSRSPPSSALAPLGGPGSG-----------SGPPGSALPLEPWLGPPLPGGGATALQSLPGFGPP 266

  Fly   430 AVGAPCPYTTPANPYMYRSA-------------AEPCMSS-----------SMSSSIATLRLKAK 470
            ..|.|..||.|  |....||             |.||..:           ..:||||.||||||
  Rat   267 GQGLPASYTPP--PPFLNSAPLGPGLQQLGPPPAYPCAPAFGDKFSLEEAYPRNSSIAALRLKAK 329

  Fly   471 QHASAGFGSPYSA 483
            :|..| .|.|:.|
  Rat   330 EHIQA-IGKPWQA 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 33/55 (60%)
RaxNP_446130.1 Octapeptide motif 33..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..141 7/28 (25%)
Homeodomain 138..194 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 209..295 23/111 (21%)
OAR 316..331 CDD:461067 10/14 (71%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 319..332 10/12 (83%)
Nuclear localization signal. /evidence=ECO:0000255 325..329 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.

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