DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and CDX2

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_011533177.1 Gene:CDX2 / 1045 HGNCID:1806 Length:321 Species:Homo sapiens


Alignment Length:398 Identity:80/398 - (20%)
Similarity:129/398 - (32%) Gaps:129/398 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GGGGVVSGALNGLEAMSAESTGLCLQDLVSAGTA---NGAGSAGSAESATTTSTALSSGSTGSST 97
            ||..|.:.|.......||:|.|........|...   ||....|:|.:|...:..|:.||..::.
Human    41 GGYHVAAAAAAAANLDSAQSPGPSWPAAYGAPLREDWNGYAPGGAAAAANAVAHGLNGGSPAAAM 105

  Fly    98 VNGGGSSTSGTEHLHSHHSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQDLVGGYSQHPHHTV 162
               |.||.:   ..|.||                         |.||            ||||..
Human   106 ---GYSSPA---DYHPHH-------------------------HPHH------------HPHHPA 127

  Fly   163 VPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLDSTHLNNFQTSSTSSIS--NRSRDRKDG 225
            ..|                        |..:.:..:|:........|::...:|  .:.|:..:.
Human   128 AAP------------------------SCASGLLQTLNPGPPGPAATAAAEQLSPGGQRRNLCEW 168

  Fly   226 NRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPD 290
            .|...:.::.::.::|             |.:..|.:.:.:.|..:|..|..|||..|..:||..
Human   169 MRKPAQQSLGSQALTS-------------PSSTVKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT 220

  Fly   291 MSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYS 355
            :..:.|:|....|:|.:|::||:|||||.||..:..:..            .|..||........
Human   221 IRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQ------------QQQQQPPQPPPPPP 273

  Fly   356 SYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGS 420
            ..|.      |.|...:..|.|::|:.|:.|.                          :|||:..
Human   274 QPPQ------PQPGPLRSVPEPLSPVSSLQAS--------------------------VPGSVPG 306

  Fly   421 SLSNTSNV 428
            .|..|..|
Human   307 VLGPTGGV 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 21/55 (38%)
CDX2XP_011533177.1 Caudal_act 13..179 CDD:461413 37/204 (18%)
Homeodomain 196..251 CDD:459649 21/54 (39%)

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