DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptx1 and dmbx1

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_017949066.1 Gene:dmbx1 / 100493907 XenbaseID:XB-GENE-486746 Length:367 Species:Xenopus tropicalis


Alignment Length:371 Identity:93/371 - (25%)
Similarity:148/371 - (39%) Gaps:116/371 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 LNNFQTSSTSSIS----------NRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKND 258
            :|.:...:.:|:|          .:::...|...||:..|: .|.::.....:.:.    |.:..
 Frog     6 VNGYSLHAMNSLSAMYNLHQQAAQQAQHAPDYRPSVHALTL-AERLAGCTFQDIIL----EARYG 65

  Fly   259 KKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRE 323
            .::::|||.||.||:|||:.||.||.:..|||:..||.:||.|||.||||:|||||||||:||::
 Frog    66 SQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQ 130

  Fly   324 RNAM------------------------NAAVAAADFKSGFGT------QFMQPFADDSLYSSYP 358
            |:..                        ::|.:..|.|....:      :.....::.|...|..
 Frog   131 RSLQKEQLQKQKDSEVSNSEGKTESTPADSATSNQDSKKAHSSVNDSSVELNLTLSEQSASESAA 195

  Fly   359 YNNWTKVPSP--------------LGTKPF------PWPVNPLGS-------------------- 383
            ..:..|...|              ..|||.      |...:|:.|                    
 Frog   196 EEHTDKEEEPKTPKEEPKTEKNPIADTKPLNCKRASPKTESPVSSTMTPSSSSCLTPTHSYSSSP 260

  Fly   384 -------------MVAGNH--HQNSVNCFNTGA---SGVAVSMNNASMLP-GSMGSSLSNTSNVG 429
                         |.|.|:  |.:|.:..:..|   .|:.|||...|.|. .|...|||:...|.
 Frog   261 LSLFRLQEQFRQHMAATNNLVHYSSFDMASPPAVPYLGMNVSMAPLSSLHCQSYYQSLSHAQQVW 325

  Fly   430 AVGAPCPYTTPANPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASA 475
                       ::|.:..|...|.::|. ::||..|||:|||||::
 Frog   326 -----------SSPILQSSGGLPSLNSK-TTSIENLRLRAKQHAAS 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 36/55 (65%)
dmbx1XP_017949066.1 Homeodomain 72..128 CDD:459649 36/55 (65%)

Return to query results.
Submit another query.