DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and alx4

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_004913406.1 Gene:alx4 / 100493396 XenbaseID:XB-GENE-853003 Length:376 Species:Xenopus tropicalis


Alignment Length:425 Identity:114/425 - (26%)
Similarity:177/425 - (41%) Gaps:112/425 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LVSAGTANGAGSAGSAESATTTSTALSSGSTGSSTVNGGGSSTSGTEHLHSHHSLHDSSSSVSIS 127
            |.|.|...|..|.||.:....:..|....::|...    ||.|.    ..:||..|....     
 Frog    47 LASKGQGFGDKSRGSFQQECQSLDANVQSNSGEQQ----GSFTK----YQAHHPSHQQQQ----- 98

  Fly   128 PAISSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGD-FRDSHSS 191
                        |||:..:                    ||...|.:.|::....|| ....::.
 Frog    99 ------------SHLYMQS--------------------TPCKSPSDSLKVQDSPGDPLIPCYAK 131

  Fly   192 MTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPK 256
            .:|:..:.|...:::...:|..:....|:||..|:..::    |||:.|:.|             
 Frog   132 ESALTPNSDHQGMDSGYITSKETAGKGSQDRGSGDLPMD----KTESESNKG------------- 179

  Fly   257 NDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRK 321
                  ::||.||.|||.||:|||..|.:..|||:..||::||.|:||||||:|||:||||||||
 Frog   180 ------KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 238

  Fly   322 RERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPL------GTKPFP---WP 377
            |||......|     ::.|.:.:..|....:       .|:.::.:|.      |..|.|   .|
 Frog   239 RERFGQMQQV-----RTHFSSAYELPLLTRA-------ENYAQIQNPSWIGNNGGGSPVPACVVP 291

  Fly   378 VNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPAN 442
            .:.:.|.::.:.|.:|       |.||:..::    :||. |:.:..|...|..|     :....
 Frog   292 CDTVSSCMSPHSHPHS-------AGGVSEFLS----VPGP-GAHVGQTHMGGLFG-----SAAMG 339

  Fly   443 PYM--YRSAAEPCMSSSMSSSIATLRLKAKQHASA 475
            |.:  |....||   ...|||||.||:|||:|::|
 Frog   340 PGINGYDLNTEP---DRKSSSIAALRMKAKEHSAA 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 36/55 (65%)
alx4XP_004913406.1 COG5576 120..266 CDD:227863 58/180 (32%)
Homeodomain 182..238 CDD:459649 36/55 (65%)
OAR 352..370 CDD:461067 11/17 (65%)

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