DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and uncx

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001305673.1 Gene:uncx / 100492016 XenbaseID:XB-GENE-920201 Length:483 Species:Xenopus tropicalis


Alignment Length:523 Identity:111/523 - (21%)
Similarity:169/523 - (32%) Gaps:219/523 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 LMPISSLSHLHHSAGQDLVG--GYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSH---SSM 192
            :|....|.|.|...|..:.|  |:          |:...|..:.:|.          ||   |:.
 Frog     1 MMDSRILEHPHAQFGGSMSGMVGF----------PYPLGHHHVYELA----------SHQLQSAA 45

  Fly   193 TAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGE-EPK 256
            .||..|:|.. ||.   |.|:|:             :|.|.:.......:|..:....|.. :|.
 Frog    46 AAVPFSIDGL-LNG---SCTASV-------------INPTPLLPSGCGLNGDSQQYKLSDSIDPD 93

  Fly   257 NDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRK 321
            .:....::||.||:||..||:|||..|:.:.|||:..||.:|:..:|.|:||:|||:||||||||
 Frog    94 KESPGCKRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWRK 158

  Fly   322 RE------------------------------------------------RNA---------MNA 329
            :|                                                ||.         |:.
 Frog   159 KENTKKGPGRPAHNSHPTTCSGEPMDPEEIARKELEKMEKKKRKQEKKMLRNQNRLQHSPGDMSL 223

  Fly   330 AVAAADFKSGF------------------------------GTQFMQ------------------ 346
            ...::|..||.                              |..|.|                  
 Frog   224 HTPSSDSDSGLSQNLDSSSLESSHPDMGQSRSQTQASCDQTGQAFFQSQRNTGQRDRVSDKESPV 288

  Fly   347 ---------------------PFADDSLYSSYPYNNWTKVPSPLGTKP---------FPWPV-NP 380
                                 ||:.:||.|..|....|.:..|..|.|         ..:|: .|
 Frog   289 EANHNSGLCPNGRGAAFQKLNPFSVESLLSDSPPKRKTGIEFPGLTNPRTLIGKGHFLLYPITQP 353

  Fly   381 LGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPG-SMGSSLSNTSNVGAVGAPCPYTTP---A 441
            ||.:|                ...::..|:|..||. .:..||.|:::    |.|...|:|   .
 Frog   354 LGFIV----------------PQASIKSNSAQELPSPGIKDSLHNSNS----GQPSLNTSPNSAQ 398

  Fly   442 NPYMYRSAAEPCMSSSMSSSIATLRLKAKQH----ASAG------FGSPYSAP-SPVSRSNSAGL 495
            |.|..:..     :|:.|:::...:.:...|    :|:|      ..|.||.| ||.|..:....
 Frog   399 NLYPNKHT-----NSTQSTTLTVCKTENGDHHGATSSSGDTGTEQLDSTYSEPKSPKSLKSDRET 458

  Fly   496 SAC 498
            ..|
 Frog   459 PEC 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 31/55 (56%)
uncxNP_001305673.1 homeobox domain 101..160 33/58 (57%)
Homeodomain 102..158 CDD:459649 31/55 (56%)

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