DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptx1 and dbx2

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_002932867.1 Gene:dbx2 / 100489622 XenbaseID:XB-GENE-481734 Length:251 Species:Xenopus tropicalis


Alignment Length:86 Identity:25/86 - (29%)
Similarity:47/86 - (54%) Gaps:12/86 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 PKND-----------KKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARV 308
            |:|:           .|.:|...:|..|:.:|.:.||..|.:.:|.....|:.:|:...|.|::|
 Frog   142 PRNEMLPPLCGQDASSKTRRVILRRAVFSEEQRKSLEKMFQKQKYISKVDRKNLAVNLALKESQV 206

  Fly   309 RVWFKNRRAKWR-KRERNAMN 328
            ::||:|||.||| .:|::.::
 Frog   207 KIWFQNRRMKWRNSKEKSVLS 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 20/56 (36%)
dbx2XP_002932867.1 Homeodomain 165..219 CDD:459649 19/53 (36%)

Return to query results.
Submit another query.