DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and pax9

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_002935394.1 Gene:pax9 / 100485934 XenbaseID:XB-GENE-482238 Length:360 Species:Xenopus tropicalis


Alignment Length:206 Identity:45/206 - (21%)
Similarity:65/206 - (31%) Gaps:83/206 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 SSYPYNN----------WTKVPSPLG-----------------------------------TKPF 374
            |:.|||:          ..|||:|.|                                   |.|:
 Frog   151 SALPYNHLYSYPSPIAAGAKVPTPPGMPSIPGTMGMPRTWPSSHSVTDILGIRSITDQVSDTSPY 215

  Fly   375 PWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVS--------MNNASMLPGSMGSSLSNTSNVGAV 431
            |.|.....|.::.|..|::.:..|    |:..|        ..:||.||...|.       |.|.
 Frog   216 PSPKLEEWSSLSRNTFQSAQHVLN----GLEKSSLEQEVKYSQSASGLPAVSGF-------VAAS 269

  Fly   432 G-APCPYTTPANPYMYRSAAEPC------------------MSSSMSSSIATLRLKAKQHASAGF 477
            | .|.|.|.|.:|||..|.|.|.                  .|..:::|:|...:...:.|....
 Frog   270 GMTPYPTTAPVSPYMAYSTAAPTGYVTGHGWQHTGGTPLSPHSCDITASLAFKGMHTAREAEESK 334

  Fly   478 GSPYSAPSPVS 488
            .|.::..||.|
 Frog   335 LSIHTRKSPQS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649
pax9XP_002935394.1 PAX 6..131 CDD:238076
Blue background indicates that the domain is not in the aligned region.

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