DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and LUT1

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_190881.2 Gene:LUT1 / 824479 AraportID:AT3G53130 Length:539 Species:Arabidopsis thaliana


Alignment Length:478 Identity:113/478 - (23%)
Similarity:210/478 - (43%) Gaps:76/478 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 WGTRIG-INRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHPWLGEGLLTSTDRKWHSR 154
            |....| |.|:..|....|::.:|...:.:|.:.....|....:......|.|...:....|.:|
plant   104 WMNEYGPIYRLAAGPRNFVIVSDPAIAKHVLRNYPKYAKGLVAEVSEFLFGSGFAIAEGPLWTAR 168

  Fly   155 RKILTPAFHFKILDDFID-VFNEQSAVLARKLA--VEVGSEAFNLFPYVTLCTLDIVCETAMGRR 216
            |:.:.|:.|.:.|...:: ||.:.:..|..||.  .|.|| |.|:....:..|||::     |..
plant   169 RRAVVPSLHRRYLSVIVERVFCKCAERLVEKLQPYAEDGS-AVNMEAKFSQMTLDVI-----GLS 227

  Fly   217 IYAQS----NSESEYVKAVYGIGSIVQSRQAKI---WLQSDFIFSLTAEYKLHQSYINTLHGFSN 274
            ::..:    .::|..::|||......:.|...:   |                     .:.....
plant   228 LFNYNFDSLTTDSPVIEAVYTALKEAELRSTDLLPYW---------------------KIDALCK 271

  Fly   275 MVIRERKAELAI----------------LQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASKE 323
            :|.|:.|||.|:                :.|......|:  :.|.:......|.||    .||:|
plant   272 IVPRQVKAEKAVTLIRETVEDLIAKCKEIVEREGERIND--EEYVNDADPSILRFL----LASRE 330

  Fly   324 GTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKN 388
              .:|:..:|:::.:.:..||:||.:.::|||:||..:.....:..||:|.:.  :...|| .::
plant   331 --EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNSSALRKAQEEVDRVL--EGRNPA-FED 390

  Fly   389 LMDMRYLECCIKDSLRLFPSVPMMARMVG-EDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQ 452
            :.:::|:..||.:|:||:|..|::.|... .|:..|...|..|...:|..|.:||:..|:.|.|:
plant   391 IKELKYITRCINESMRLYPHPPVLIRRAQVPDILPGNYKVNTGQDIMISVYNIHRSSEVWEKAEE 455

  Fly   453 FNPDNFLPENCAGRHP------FAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRRE 511
            |.|:.|   :..|..|      |.:||||.|||.|:|.:||::|....::..|::..:|.|. .:
plant   456 FLPERF---DIDGAIPNETNTDFKFIPFSGGPRKCVGDQFALMEAIVALAVFLQRLNVELVP-DQ 516

  Fly   512 DLTLLGELILRPKDGLRVKITPR 534
            .:::.....:...:||.:|::.|
plant   517 TISMTTGATIHTTNGLYMKVSQR 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 111/473 (23%)
LUT1NP_190881.2 PLN02936 56..539 CDD:178524 112/476 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 1 0.900 - - OOG6_100014
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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