DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and cyp4v2.2

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001072667.1 Gene:cyp4v2.2 / 780124 XenbaseID:XB-GENE-977085 Length:523 Species:Xenopus tropicalis


Alignment Length:509 Identity:246/509 - (48%)
Similarity:349/509 - (68%) Gaps:12/509 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAA-MPFLGNAIEMNVDHDELFNRVIGMQKLWG 92
            :|:..| |||..|..|.::|    :.::.||||.. .|.:|:|:.:..:..:.|.::....:.:.
 Frog    20 LTLLAL-SILPALQDYVRKR----RILKPIPGPGPNYPLIGDALFLKNNGGDFFLQICEYTESYR 79

  Fly    93 TRIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHPWLGEGLLTSTDRKWHSRRKI 157
            .: .:.:||.||.|.::::..:||||:|:|.|.::|:..|.:||||||:||||||..||.||||:
 Frog    80 LQ-PLLKVWIGTIPFIVVYHADTVEPVLSSSKHMDKAFLYKFLHPWLGKGLLTSTGEKWRSRRKM 143

  Fly   158 LTPAFHFKILDDFIDVFNEQSAVLARKLAVEVGSEAFNLFPYVTLCTLDIVCETAMGRRIYAQSN 222
            :||.|||.||.:|::|.||||.:|..||...|..|:|:.|..||||.|||:.||||||:|.||||
 Frog   144 ITPTFHFAILSEFLEVMNEQSKILVEKLQTHVDGESFDCFMDVTLCALDIISETAMGRKIQAQSN 208

  Fly   223 SESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYINTLHGFSNMVIRERKAELAIL 287
            .:||||:|:|.:..|:|.||...||..||:::...:.|.|...:..||.|::..|.||..||..:
 Frog   209 RDSEYVQAIYKMSDIIQRRQKMPWLWLDFLYAHLRDGKEHDKNLKILHSFTDKAILERAEELKKM 273

  Fly   288 QENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASKE-GTVLSNEDIREEVDTFMFEGHDTTSAAI 351
            .|....:.::.|::..   .|||.||||:|:.|:.: |..:|..|||||||||||||||||:||:
 Frog   274 GEQKKEHCDSDPESDK---PKKRSAFLDMLLMATDDAGNKMSYMDIREEVDTFMFEGHDTTAAAL 335

  Fly   352 SWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMMARMV 416
            :|:|||||.|||.|.:|.:|||.:|| ..:.|.||.:|..:||||..||:|||::||||:..|.|
 Frog   336 NWSLFLLGSHPEAQRQVHKELDEVFG-KSDRPVTMDDLKKLRYLEAVIKESLRIYPSVPLFGRTV 399

  Fly   417 GEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENCAGRHPFAYIPFSAGPRNC 481
            .||.:|.|..||.|...:|:.|||||:|..||:||:|.|:.|.|||.:||:|:||||||||.|||
 Frog   400 TEDCSIRGFHVPKGVNVVIIPYALHRDPEYFPEPEEFRPERFFPENASGRNPYAYIPFSAGLRNC 464

  Fly   482 IGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGELILRPKDGLRVKITPRD 535
            |||:||::|||.|:|::||.|.:||..:||:|.|||||||||:||:.:|:..|:
 Frog   465 IGQRFALMEEKVVLSSILRNYWVEASQKREELCLLGELILRPQDGMWIKLKNRE 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 235/473 (50%)
cyp4v2.2NP_001072667.1 p450 45..509 CDD:365848 233/468 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 467 1.000 Domainoid score I460
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H133054
Inparanoid 1 1.050 478 1.000 Inparanoid score I1439
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 1 1.000 - - oto103614
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4308
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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