DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4c3 and Cyp20a1

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_084289.1 Gene:Cyp20a1 / 77951 MGIID:1925201 Length:462 Species:Mus musculus


Alignment Length:526 Identity:108/526 - (20%)
Similarity:200/526 - (38%) Gaps:98/526 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAIEMNVDHDELFNRVIGMQKLWGTRIG 96
            |||..:...|.:|...|.     ...|||..........:...|:...|...::.:.:.:|..:.
Mouse    11 FLLALVGAVLYLYPASRQ-----ASGIPGLTPTEEKDGNLPDIVNSGSLHEFLVNLHERYGPVVS 70

  Fly    97 INRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHD--YDYLHPWLGEGLLTSTDRKWHSRRKI-- 157
            .   |.|....|.|...:.::...|.    ||:.|  ...|...||......:..:.|.|||:  
Mouse    71 F---WFGRRLVVSLGTTDVLKQHFNP----NKTSDPFETMLKSLLGYQSGGGSAGEDHVRRKLYG 128

  Fly   158 --LTPAFHF----------KILDDFIDVFNEQSAVLARKLAVEVGSEAFNLFPYVTLCTLDIVCE 210
              :|.:.|.          ::||.::.....|...|::.:.      .|.| .:||         
Mouse   129 DAVTASLHSNFPLLLQLSEELLDKWLSYPETQHIPLSQHML------GFAL-KFVT--------- 177

  Fly   211 TAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYINTLHGFSNM 275
                |.:...:..:.:.|.....|...|.|...|.:|... :...|...|.:|..:..|......
Mouse   178 ----RMVLGSTFEDEQEVIRFQKIHGTVWSEIGKGFLDGS-LDKNTTRKKQYQEALMQLESTLKK 237

  Fly   276 VIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASKEGTVLSNEDIREEVDTFM 340
            :|:|||.                       |..::..|:|.|....     |:.:.|.|:...|.
Mouse   238 IIKERKG-----------------------GNFRQHTFIDSLTQGK-----LNEQQILEDCVVFS 274

  Fly   341 FEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRL 405
            ......|:...:||:..|....|.|:::.:|:|.:.|   |.|.|.:.:..:.|.:..:.:::|.
Mouse   275 LASCIITARLCTWTIHFLTTTGEVQKKLCKEIDQVLG---EGPITSEKIEQLSYCQQVLFETVRT 336

  Fly   406 FPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALH---RNPRVFPKPEQFNPDNFLPENCAGRH 467
            ....|:.||:...:..:|..::|..|   ::.|||.   ::|..:|.|.:|:||.|..|      
Mouse   337 AKLTPVSARLQDIEGKVGPFVIPKET---LVLYALGVVLQDPSTWPLPHRFDPDRFADE------ 392

  Fly   468 P----FAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGELILRPKDGLR 528
            |    |:.:.|| |...|...:||.:....::|.:|::.::.||| |:...:..||:...::...
Mouse   393 PVMKVFSSLGFS-GTWECPELRFAYMVTAVLVSVLLKRLRLLAVD-RQVFEMKYELVTSAREEAW 455

  Fly   529 VKITPR 534
            :.::.|
Mouse   456 ITVSKR 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 100/494 (20%)
Cyp20a1NP_084289.1 p450 43..446 CDD:299894 96/472 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.