DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and Cyp4f1

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_062569.2 Gene:Cyp4f1 / 56266 RGDID:70926 Length:524 Species:Rattus norvegicus


Alignment Length:525 Identity:183/525 - (34%)
Similarity:272/525 - (51%) Gaps:58/525 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FLLGSIL--IFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAIEMNVDHDELFNRVIGMQKLWGTR 94
            ::|..||  |:....|.||.|      ..|.|....:|...:.|....::      |:::|  ||
  Rat    29 WILAQILTQIYAAYRNFRRLR------GFPQPPKRNWLMGHVGMVTPTEQ------GLKEL--TR 79

  Fly    95 I------GINRVWQG-TAPRVLLFEPETVEPILNSQKFVNKSH--DYDYLHPWLGEGLLTSTDRK 150
            :      |. .:|.| ..|.:.|...:.|..|||:...|....  .|..|.||||:|||.|...|
  Rat    80 LVGTYPQGF-LMWIGPMVPVITLCHSDIVRSILNASAAVALKDVIFYTILKPWLGDGLLVSAGDK 143

  Fly   151 WHSRRKILTPAFHFKILDDFIDVFNEQSAVLAR--KLAVEVGSEAFNLFPYVTLCTLDIVCETAM 213
            |...|::|||||||.||..::.:||:.:.::..  |..:..||...::|.:|:|.|||.:.:...
  Rat   144 WSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWKRLISEGSSRLDMFEHVSLMTLDSLQKCVF 208

  Fly   214 GRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYINTLHGFSNMVIR 278
            ......|..| |||:.|:..:.::|..|..:..|..|.:::||.:........|.:|.|::.|||
  Rat   209 SFDSNCQEKS-SEYIAAILELSALVAKRHQQPLLFMDLLYNLTPDGMRFHKACNLVHEFTDAVIR 272

  Fly   279 ERKAELAILQENNNNNNNNAPD-AYDDV----GKKKRLAFLD-LLIDASKEGTVLSNEDIREEVD 337
            ||:..|              || ..|:.    .|.|.|.|:| ||:...::|..||:||||.|.|
  Rat   273 ERRRTL--------------PDQGLDEFLKSKAKSKTLDFIDVLLLTKDEDGKELSDEDIRAEAD 323

  Fly   338 TFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDS 402
            ||||||||||::.:||.|:.|..|||||||..:|:..:..|.........:|..:.:|..|||:|
  Rat   324 TFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDPEEIEWDDLAQLPFLTMCIKES 388

  Fly   403 LRLFPSVPMMARMVGEDVNI-GGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENCAGR 466
            |||.|.|.:::|...:|:.: .|:.:|.|...:|..:.:|.||.|:|.||.:||..|.|||....
  Rat   389 LRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEVYNPFRFDPENIKDS 453

  Fly   467 HPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVD---RREDLTLLGELILRPKDGLR 528
            .|.|:|||||||||||||.||:.|.|..::..|.::::...|   ||:.     |||||.:.||.
  Rat   454 SPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRLLPDDKEPRRQP-----ELILRAEGGLW 513

  Fly   529 VKITP 533
            :::.|
  Rat   514 LRVEP 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 174/492 (35%)
Cyp4f1NP_062569.2 CYP4F 74..515 CDD:410772 169/463 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348443
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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