DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and cyp26a1

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_012822016.1 Gene:cyp26a1 / 548901 XenbaseID:XB-GENE-855583 Length:492 Species:Xenopus tropicalis


Alignment Length:517 Identity:127/517 - (24%)
Similarity:206/517 - (39%) Gaps:117/517 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PGPAAMPFLGNAIEMNVDHDELFNRVIGMQKLWGTRIGINRVWQGTAPRVLLFEPETV------- 116
            ||...:||.|..::|          |:..:|.    :.:.|...|...:..||...||       
 Frog    46 PGTMGLPFFGETLQM----------VLQRRKF----LQVKRRKYGRIYKTHLFGSPTVRVTGAEN 96

  Fly   117 --EPILNSQKFVNKSHDYDYLHPW-------LGEGLLTSTDRKWHS-RRKILTPAFHFKILDDFI 171
              :.:|...|.|:       :| |       ||.|.|::.....|. .:|::..||..:.|.:::
 Frog    97 VRQILLGEHKLVS-------VH-WPASVRTILGAGCLSNLHDSEHKYTKKVIMQAFSREALANYV 153

  Fly   172 DVFNEQSAVLARKLAVEVGSEAFNL-FPYVTLCTLDIVCETAMG---RRIYAQSNSESEYVKAVY 232
            .:..|:   |.|.:.:.:.|::..| :|.:......|.....:|   :|:               
 Frog   154 PLMEEE---LRRSVNLWLQSDSCVLVYPAIKRLMFRIAMRLLLGCDPQRL--------------- 200

  Fly   233 GIGSIVQSRQAKIWLQSDF------IFSLTAEYKLHQSYINTLHGFSNMV--IRERKAELAILQE 289
                   .|:.:..|...|      :|||..:..           ||.:.  :|.|....|.::|
 Frog   201 -------GREQEETLLEAFEEMTRNLFSLPIDVP-----------FSGLYRGLRARNIIHAQIEE 247

  Fly   290 NNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASKE-GTVLSNEDIREEVDTFMFEGHDTT-SAAIS 352
            |........||.      :.|.| |.||||.|:. |..::.:.::|.....:|.||.|| |||.|
 Frog   248 NIKEKLQREPDG------QCRDA-LQLLIDHSRRTGEPVNLQALKESATELLFGGHGTTASAATS 305

  Fly   353 WTLFLLGCHPEYQERVVEELDS--IFGD--DKETPATMKNLMDMRYLECCIKDSLRLFPSVPMMA 413
            .|.| |..|.:..|:|.:||:|  :..:  :::...:::.|..::|..|.||::|||.|.|....
 Frog   306 LTTF-LALHKDVLEKVRKELESQGLLSNKPEEKKELSIEVLQQLKYTSCVIKETLRLSPPVAGGF 369

  Fly   414 RMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENCAGRHPFAYIPFSAGP 478
            |:..:...:.|..:|.|...|......|....:||..::||||.||.........|.:|||..|.
 Frog   370 RVALKTFVLNGYQIPKGWNVIYSIADTHGEAELFPDKDEFNPDRFLTPLPGDSSRFGFIPFGGGV 434

  Fly   479 RNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLG-------ELILRPKDGLRVKITP 533
            |.|:|::||         .:|.|..|..:.|..|..||.       ..|:.|.|.|..|..|
 Frog   435 RCCVGKEFA---------KILLKVFIVELCRNCDWELLNGSPAMKTSPIICPVDNLPAKFKP 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 125/513 (24%)
cyp26a1XP_012822016.1 p450 41..490 CDD:386267 127/517 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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